7KZN | pdb_00007kzn

Outer dynein arm core subcomplex from C. reinhardtii


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2 FamilyRoadblock/LC7 domain-like 8102510 4001551 SCOP2 (2022-06-29)
ISCOP2 SuperfamilyRoadblock/LC7 domain-like 8102511 3001810 SCOP2 (2022-06-29)
HSCOP2B SuperfamilyDLC-like 8102451 3000821 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyDLC-like 8102447 3000821 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRoadblock/LC7 domain-like 8102337 3001810 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IRobl_LC7e7kznI1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: Robl_LC7ECOD (1.6)
HDynein_lighte7kznH1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
GEF-hand_7e7kznG2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7ECOD (1.6)
GEF-hand_7_5e7kznG1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
FTctex-1e7kznF1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Tctex-1ECOD (1.6)
S [auth Z]EF-hand_7_2e7kznZ2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_2ECOD (1.6)
S [auth Z]EF-hand_7_4e7kznZ1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_4ECOD (1.6)
PDynein_lighte7kznP1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
OTctex-1e7kznO1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Tctex-1ECOD (1.6)
NDynein_lighte7kznN1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
MDynein_lighte7kznM1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
LDynein_lighte7kznL1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
KDynein_lighte7kznK1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
JRobl_LC7e7kznJ1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: Robl_LC7ECOD (1.6)
AKelch_1e7kznA1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: Kelch_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
P3.30.740.10 Alpha Beta 2-Layer Sandwich Protein Inhibitor Of Neuronal Nitric Oxide Synthase Protein Inhibitor Of Neuronal Nitric Oxide SynthaseCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03259Roadblock/LC7 domain (Robl_LC7)Roadblock/LC7 domainThis family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.
Domain
PF01221Dynein light chain type 1 (Dynein_light)Dynein light chain type 1Domain
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain
PF03645Tctex-1 family (Tctex-1)Tctex-1 family- Family
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF08385Dynein heavy chain, N-terminal region 1 (DHC_N1)Dynein heavy chain, N-terminal region 1- Family
PF08385Dynein heavy chain, N-terminal region 1 (DHC_N1)Dynein heavy chain, N-terminal region 1- Family
PF01221Dynein light chain type 1 (Dynein_light)Dynein light chain type 1Domain
PF03259Roadblock/LC7 domain (Robl_LC7)Roadblock/LC7 domainThis family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is pro ...This family includes proteins that are about 100 amino acids long and have been shown to be related [3]. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions [2]. This family also includes Swiss:Q9Y2Q5 Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus Swiss:Q50883, a protein involved in gliding motility [4]. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.
Domain
PF13418tRNA wybutosine-synthesizing protein 4, beta-propeller (Beta-prop_TYW4)tRNA wybutosine-synthesizing protein 4, beta-propeller- Repeat
PF07646Kelch motif (Kelch_2)Kelch motif- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Dynein light chain roadblock LC7a
Dynein 11 kDa light chain, flagellar outer arm-
Dynein 18 kDa light chain, flagellar outer arm -
Flagellar outer dynein arm light chain 2
Dynein, 70 kDa intermediate chain, flagellar outer arm-
Dynein, 78 kDa intermediate chain, flagellar outer arm- -
Dynein gamma chain, flagellar outer arm
Flagellar outer dynein arm heavy chain beta
S [auth Z]Outer dynein arm-docking complex protein DC3 -
R [auth Y]DC2---
Q [auth X]DC1---
Dynein light chain 10-
Dynein light chain 9
K, L, M, N
Dynein 8 kDa light chain, flagellar outer arm-
Dynein light chain roadblock LC7b
Heavy chain alpha

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016561Dynein light chain roadblock-type 1/2Family
IPR004942Roadblock/LAMTOR2 domainDomain
IPR037177Dynein light chain superfamilyHomologous Superfamily
IPR001372Dynein light chain, type 1/2Family
IPR019763Dynein light chain, type 1/2, conserved siteConserved Site
IPR050230Calmodulin/Myosin light chain/Troponin C-likeFamily
IPR018247EF-Hand 1, calcium-binding siteBinding Site
IPR002048EF-hand domainDomain
IPR011992EF-hand domain pairHomologous Superfamily
IPR005334Dynein light chain Tctex-1 likeFamily
IPR038586Tctex-1-like superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
IPR050687Dynein Intermediate ChainFamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR001680WD40 repeatRepeat
IPR050687Dynein Intermediate ChainFamily
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
IPR026983Dynein heavy chainFamily
IPR013602Dynein heavy chain, linkerDomain
IPR035706Dynein heavy chain, ATP-binding dynein motor regionDomain
IPR041228Dynein heavy chain, C-terminal domainDomain
IPR003593AAA+ ATPase domainDomain
IPR056759Dynein axonemal heavy chain 2/5/8, coiled-coil domainDomain
IPR041466Dynein heavy chain, AAA 5 extension domainDomain
IPR041658Dynein heavy chain AAA lid domainDomain
IPR041589Dynein heavy chain 3, AAA+ lid domainDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR042228Dynein heavy chain, linker, subdomain 3Homologous Superfamily
IPR035699Dynein heavy chain, hydrolytic ATP-binding dynein motor regionDomain
IPR042219Dynein heavy chain AAA lid domain superfamilyHomologous Superfamily
IPR024743Dynein heavy chain, coiled coil stalkDomain
IPR013594Dynein heavy chain, tailDomain
IPR043157Dynein heavy chain, AAA1 domain, small subdomainHomologous Superfamily
IPR042222Dynein heavy chain, domain 2, N-terminalHomologous Superfamily
IPR043160Dynein heavy chain, C-terminal domain, barrel regionHomologous Superfamily
IPR004273Dynein heavy chain region D6 P-loop domainDomain
IPR024317Dynein heavy chain, AAA module D4Domain
IPR026983Dynein heavy chainFamily
IPR013602Dynein heavy chain, linkerDomain
IPR035706Dynein heavy chain, ATP-binding dynein motor regionDomain
IPR041228Dynein heavy chain, C-terminal domainDomain
IPR041466Dynein heavy chain, AAA 5 extension domainDomain
IPR041658Dynein heavy chain AAA lid domainDomain
IPR041589Dynein heavy chain 3, AAA+ lid domainDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR042228Dynein heavy chain, linker, subdomain 3Homologous Superfamily
IPR035699Dynein heavy chain, hydrolytic ATP-binding dynein motor regionDomain
IPR042219Dynein heavy chain AAA lid domain superfamilyHomologous Superfamily
IPR024743Dynein heavy chain, coiled coil stalkDomain
IPR013594Dynein heavy chain, tailDomain
IPR043157Dynein heavy chain, AAA1 domain, small subdomainHomologous Superfamily
IPR042222Dynein heavy chain, domain 2, N-terminalHomologous Superfamily
IPR043160Dynein heavy chain, C-terminal domain, barrel regionHomologous Superfamily
IPR004273Dynein heavy chain region D6 P-loop domainDomain
IPR024317Dynein heavy chain, AAA module D4Domain
S [auth Z]IPR018247EF-Hand 1, calcium-binding siteBinding Site
S [auth Z]IPR002048EF-hand domainDomain
S [auth Z]IPR011992EF-hand domain pairHomologous Superfamily
S [auth Z]IPR050145Centrin/CML-likeFamily
IPR037177Dynein light chain superfamilyHomologous Superfamily
IPR001372Dynein light chain, type 1/2Family
IPR005334Dynein light chain Tctex-1 likeFamily
IPR038586Tctex-1-like superfamilyHomologous Superfamily
K, L, M, N
IPR037177Dynein light chain superfamilyHomologous Superfamily
K, L, M, N
IPR001372Dynein light chain, type 1/2Family
K, L, M, N
IPR019763Dynein light chain, type 1/2, conserved siteConserved Site
IPR016561Dynein light chain roadblock-type 1/2Family
IPR004942Roadblock/LAMTOR2 domainDomain
IPR026983Dynein heavy chainFamily
IPR002909IPT domainDomain
IPR013602Dynein heavy chain, linkerDomain
IPR035706Dynein heavy chain, ATP-binding dynein motor regionDomain
IPR001736Phospholipase D/TransphosphatidylaseDomain
IPR041228Dynein heavy chain, C-terminal domainDomain
IPR003593AAA+ ATPase domainDomain
IPR014756Immunoglobulin E-setHomologous Superfamily
IPR011043Galactose oxidase/kelch, beta-propellerHomologous Superfamily
IPR041466Dynein heavy chain, AAA 5 extension domainDomain
IPR041658Dynein heavy chain AAA lid domainDomain
IPR041589Dynein heavy chain 3, AAA+ lid domainDomain
IPR015915Kelch-type beta-propellerHomologous Superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR042228Dynein heavy chain, linker, subdomain 3Homologous Superfamily
IPR035699Dynein heavy chain, hydrolytic ATP-binding dynein motor regionDomain
IPR042219Dynein heavy chain AAA lid domain superfamilyHomologous Superfamily
IPR024743Dynein heavy chain, coiled coil stalkDomain
IPR043157Dynein heavy chain, AAA1 domain, small subdomainHomologous Superfamily
IPR017868Filamin/ABP280 repeat-likeRepeat
IPR042222Dynein heavy chain, domain 2, N-terminalHomologous Superfamily
IPR013783Immunoglobulin-like foldHomologous Superfamily
IPR043160Dynein heavy chain, C-terminal domain, barrel regionHomologous Superfamily
IPR004273Dynein heavy chain region D6 P-loop domainDomain
IPR011498Kelch repeat type 2Repeat
IPR024317Dynein heavy chain, AAA module D4Domain
IPR001298Filamin/ABP280 repeatRepeat