7KX6 | pdb_00007kx6

Crystal structure of DCLK1-KD in complex with XMD8-85

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Protein kinase-like (PK-like)	8062424	3000066	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Protein kinase-like (PK-like)	8062424	3000066	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ABC_tran	e7kx6B1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: ABC_tran	ECOD (develop294)
A	ABC_tran	e7kx6A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: ABC_tran	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Serine/threonine-protein kinase DCLK1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine/threonine kinase activity protein serine kinase activity	localization cellular localization transport establishment of localization in cell cellular process intracellular transport establishment of localization vesicle-mediated transport endosomal transport developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development localization cellular localization transport establishment of localization in cell cellular process intracellular transport establishment of localization vesicle-mediated transport endosomal transport developmental process multicellular organism development multicellular organismal process central nervous system development anatomical structure development nervous system development system development protein phosphorylation phosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus axon extension axonogenesis cellular developmental process developmental growth cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell growth cell morphogenesis cellular component organization neurogenesis cell projection morphogenesis neuron differentiation neuron projection morphogenesis cell differentiation cellular component organization or biogenesis neuron projection extension plasma membrane bounded cell projection organization developmental cell growth growth axon development cell morphogenesis involved in neuron differentiation developmental growth involved in morphogenesis generation of neurons anatomical structure morphogenesis neuron development cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation signal transduction intracellular signal transduction cell communication protein localization to organelle macromolecule localization protein localization to nucleus intracellular protein localization	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B	IPR003533	Doublecortin domain	Domain
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR036572	Doublecortin domain superfamily	Homologous Superfamily
A, B	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: O15075	colorectal cancer IgA glomerulonephritis juvenile dermatomyositis lung cancer malignant ependymoma amyotrophic lateral sclerosis medulloblastoma atypical teratoid rhabdoid tumor ovarian cancer breast cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pilocytic astrocytoma colorectal carcinoma primitive neuroectodermal tumor diabetes mellitus colorectal cancer IgA glomerulonephritis juvenile dermatomyositis lung cancer malignant ependymoma amyotrophic lateral sclerosis medulloblastoma atypical teratoid rhabdoid tumor ovarian cancer breast cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pilocytic astrocytoma colorectal carcinoma primitive neuroectodermal tumor diabetes mellitus Sjogren syndrome ductal breast carcinoma in situ gastric adenocarcinoma interstitial cystitis large cell medulloblastoma lung carcinoma malignant glioma astrocytic tumor myopathy Becker muscular dystrophy pancreatic intraductal papillary-mucinous carcinoma Parkinson disease breast carcinoma pituitary cancer Colorectal Neoplasms psoriasis Down syndrome subependymal giant cell astrocytoma Emery-Dreifuss muscular dystrophy glioblastoma invasive ductal breast carcinoma limb-girdle muscular dystrophy malignant colon neoplasm malignant mesothelioma atopic eczema oligodendroglioma bipolar disorder pancreatic intraductal papillary-mucinous neoplasm Pick disease plasma cell myeloma cystic fibrosis schizophrenia Duchenne muscular dystrophy facioscapulohumeral muscular dystrophy

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.