7KU6 | pdb_00007ku6

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAldolase 8059131 3000445 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FIsochorismatasee7ku6F1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)
EIsochorismatasee7ku6E1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)
DIsochorismatasee7ku6D1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)
CIsochorismatasee7ku6C1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)
BIsochorismatasee7ku6B1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)
AIsochorismatasee7ku6A1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: IsochorismataseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)
E3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E, F
PF00701Dihydrodipicolinate synthetase family (DHDPS)Dihydrodipicolinate synthetase familyThis family has a TIM barrel structure. Domain
A, B, C, D
PF00701Dihydrodipicolinate synthetase family (DHDPS)Dihydrodipicolinate synthetase familyThis family has a TIM barrel structure. Domain

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C, D
KPI Parent Component: LYS

RESIDAA0287

PSI-MOD :  N6-pyruvic acid 2-iminyl-L-lysine MOD:00292