Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H56N mutant with pyruvate bound in the active site
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Aldolase | 8059131 | 3000445 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F | Isochorismatase | e7ku6F1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
| E | Isochorismatase | e7ku6E1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
| D | Isochorismatase | e7ku6D1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
| C | Isochorismatase | e7ku6C1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
| B | Isochorismatase | e7ku6B1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
| A | Isochorismatase | e7ku6A1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Isochorismatase | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| F | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (utative) |
| E | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00701 | Dihydrodipicolinate synthetase family (DHDPS) | Dihydrodipicolinate synthetase family | This family has a TIM barrel structure. | Domain | |
| PF00701 | Dihydrodipicolinate synthetase family (DHDPS) | Dihydrodipicolinate synthetase family | This family has a TIM barrel structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | - | |||
| 4-hydroxy-tetrahydrodipicolinate synthase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR020624 | Schiff base-forming aldolase, conserved site | Conserved Site | |
| IPR005263 | 4-hydroxy-tetrahydrodipicolinate synthase, DapA | Family | |
| IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
| IPR020625 | Schiff base-forming aldolase, active site | Active Site | |
| IPR002220 | DapA-like | Family | |
| IPR020624 | Schiff base-forming aldolase, conserved site | Conserved Site | |
| IPR005263 | 4-hydroxy-tetrahydrodipicolinate synthase, DapA | Family | |
| IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
| IPR020625 | Schiff base-forming aldolase, active site | Active Site | |
| IPR002220 | DapA-like | Family |














