7KLJ | pdb_00007klj

Crystal structure of the WD-repeat domain of human KIF21A

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Macro	e7kljB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Macro	ECOD (v294.1)
A	Macro	e7kljA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Macro	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Isoform 2 of Kinesin-like protein KIF21A	ankyrin repeat binding protein binding binding protein domain specific binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding ankyrin repeat binding protein binding binding protein domain specific binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cytoskeletal protein binding microtubule binding tubulin binding plus-end-directed microtubule motor activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides	multicellular organismal process axonogenesis regulation of cellular process response to stimulus cell projection organization neuron projection development multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis taxis regulation of axon guidance cell differentiation anatomical structure development multicellular organismal process axonogenesis regulation of cellular process response to stimulus cell projection organization neuron projection development multicellular organism development cell projection morphogenesis neuron differentiation neuron projection morphogenesis taxis regulation of axon guidance cell differentiation anatomical structure development system development developmental process chemotaxis regulation of biological process regulation of cell projection organization response to external stimulus nervous system development generation of neurons regulation of response to stimulus response to chemical regulation of locomotion regulation of neuron projection development regulation of cellular component organization cellular developmental process regulation of response to external stimulus plasma membrane bounded cell projection morphogenesis cell development cell morphogenesis cellular component organization neurogenesis cellular component organization or biogenesis locomotion plasma membrane bounded cell projection organization biological regulation axon guidance axon development regulation of chemotaxis cell morphogenesis involved in neuron differentiation anatomical structure morphogenesis neuron projection guidance neuron development cellular process regulation of plasma membrane bounded cell projection organization cellular localization anterograde axonal transport transport intracellular transport axonal transport establishment of localization localization axo-dendritic transport establishment of localization in cell microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport microtubule-based movement microtubule-based process cortical cytoskeleton organization microtubule cytoskeleton organization cytoplasmic microtubule organization cortical microtubule organization organelle organization supramolecular fiber organization cytoskeleton organization regulation of cytoskeleton organization regulation of microtubule polymerization or depolymerization protein-containing complex disassembly regulation of protein-containing complex disassembly regulation of microtubule depolymerization microtubule polymerization or depolymerization cellular component disassembly protein-containing complex organization regulation of protein depolymerization regulation of microtubule-based process regulation of organelle organization microtubule depolymerization regulation of supramolecular fiber organization protein depolymerization regulation of microtubule cytoskeleton organization cellular component biogenesis regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly protein polymerization microtubule polymerization regulation of cellular component biogenesis regulation of microtubule polymerization regulation of protein polymerization	growth cone axon cell projection cellular anatomical structure distal axon neuron projection axonal growth cone plasma membrane bounded cell projection site of polarized growth cell periphery cell cortex intracellular anatomical structure cytoplasm cytosol growth cone axon cell projection cellular anatomical structure distal axon neuron projection axonal growth cone plasma membrane bounded cell projection site of polarized growth cell periphery cell cortex intracellular anatomical structure cytoplasm cytosol protein-containing complex intracellular membraneless organelle intracellular organelle cytoskeleton organelle membraneless organelle microtubule associated complex kinesin complex microtubule cytoskeleton presynapse synapse cell junction somatodendritic compartment dendrite dendritic tree polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex neuron projection cytoplasm axon cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036961	Kinesin motor domain superfamily	Homologous Superfamily
A, B	IPR001752	Kinesin motor domain	Domain
A, B	IPR019775	WD40 repeat, conserved site	Conserved Site
A, B	IPR056533	KIF21A/B, first helical domain	Domain
A, B	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR027640	Kinesin-like protein	Family
A, B	IPR056532	KIF21A/B, second helical domain	Domain
A, B	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A, B	IPR001680	WD40 repeat	Repeat
A, B	IPR019821	Kinesin motor domain, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q7Z4S6	congenital fibrosis of extraocular muscles congenital fibrosis of extraocular muscles type 1 small cell lung carcinoma medulloblastoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma periodontitis small cell carcinoma amyotrophic lateral sclerosis spina bifida breast carcinoma Fibrosis of Extraocular Muscles, Congenital, 3B gastric carcinoma intellectual disability malignant ependymoma congenital fibrosis of extraocular muscles congenital fibrosis of extraocular muscles type 1 small cell lung carcinoma medulloblastoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma periodontitis small cell carcinoma amyotrophic lateral sclerosis spina bifida breast carcinoma Fibrosis of Extraocular Muscles, Congenital, 3B gastric carcinoma intellectual disability malignant ependymoma myopathy ovarian cancer pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma atypical teratoid rhabdoid tumor tuberculosis chronic obstructive pulmonary disease facioscapulohumeral muscular dystrophy glioblastoma large cell medulloblastoma malignant glioma nasopharyngeal carcinoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia sinusitis breast cancer gastric cancer head and neck cancer lung carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.