7KLD | pdb_00007kld

Crystal Structure of an Essential Ribosomal Processing Protease Prp from S. aureus in complex with a covalently linked product Peptide

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyTM1457-like 8104379 3001371 SCOP2B (2022-06-29)
BSCOP2 FamilyTM1457-like 8104378 4003731 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyTM1457-like 8104379 3001371 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyTM1457-like 8104379 3001371 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DLbH_EIF2Be7kldD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: LbH_EIF2BECOD (v294.1)
BLbH_EIF2Be7kldB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: LbH_EIF2BECOD (v294.1)
ALbH_EIF2Be7kldA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: LbH_EIF2BECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, D
PF04327Cysteine protease Prp (Peptidase_Prp)Cysteine protease Prp- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C,
E,
F [auth Q]		LYS-LEU-ASN-LEU-GLN-PHE-PCS---
A, B, D
Phage-related ribosomal protease -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, D
IPR036764Cysteine protease Prp superfamilyHomologous Superfamily
A, B, D
IPR007422Cysteine protease PrpFamily