7KFT
Partial Cas6-RT-Cas1--Cas2 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF09827 | e7kftB1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09827 | ECOD (1.6) |
B [auth A] | PF09827 | e7kftA1 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR associated protein Cas2-like (From Topology) | T: CRISPR associated protein Cas2-like | F: PF09827 | ECOD (1.6) |
C [auth D] | PF01867 | e7kftD1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
D [auth C] | PF00078 | e7kftC1 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: PF00078 | ECOD (1.6) |
D [auth C] | F_UNCLASSIFIED | e7kftC3 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth C] | PF10040 | e7kftC2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF10040 | ECOD (1.6) |
E | PF01867 | e7kftE1 | A: alpha complex topology | X: Cas1 (From Topology) | H: Cas1 (From Topology) | T: Cas1 | F: PF01867 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF09827 | CRISPR associated protein Cas2 (CRISPR_Cas2) | CRISPR associated protein Cas2 | - | Family |
C [auth D], D [auth C], E | PF01867 | CRISPR associated protein Cas1 (Cas_Cas1) | CRISPR associated protein Cas1 | - | Family |
C [auth D], D [auth C], E | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) | Reverse transcriptase (RNA-dependent DNA polymerase) | A reverse transcriptase gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. Reverse transcriptases occur in a variety of mobile elements, including retrotransposons, retroviruses, group II introns, bacterial msDNAs ... | Domain |