7JY6
Analysis of a strand exchange reaction with a mini filament of 9-RecA, oligo(dT)27 primary ssDNA, non-homologous 120 bp dsDNA and ATPgammaS
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | RecA C-terminal domain-like | 8056608 | 3000958 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018145 | 3002019 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | recA | e7jy6C1 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
C | RecA | e7jy6C2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
D | recA | e7jy6D2 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
D | RecA | e7jy6D1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
E | recA | e7jy6E2 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
E | RecA | e7jy6E1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
G | recA | e7jy6G1 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
G | RecA | e7jy6G2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
I | recA | e7jy6I1 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
I | RecA | e7jy6I2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
A | recA | e7jy6A1 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
A | RecA | e7jy6A2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
B | recA | e7jy6B2 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
B | RecA | e7jy6B1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
F | recA | e7jy6F1 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
F | RecA | e7jy6F2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
H | recA | e7jy6H2 | A: a+b two layers | X: Anti-LPS factor/recA domain (From Topology) | H: Anti-LPS factor/recA domain (From Topology) | T: Anti-LPS factor/recA domain | F: recA | ECOD (1.6) |
H | RecA | e7jy6H1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: RecA | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21096 | RecA C-terminal domain (RecA_C) | RecA C-terminal domain | This entry represents a small domain found at the C-terminus of RecA. The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response This domain adopts a structure compose ... | Domain | |
PF00154 | recA bacterial DNA recombination protein (RecA) | recA bacterial DNA recombination protein | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR049261 | RecA-like, C-terminal | Domain | |
IPR020587 | DNA recombination and repair protein RecA, monomer-monomer interface | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR020584 | DNA recombination/repair protein RecA, conserved site | Conserved Site | |
IPR023400 | DNA recombination and repair protein RecA, C-terminal, superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR020588 | DNA recombination and repair protein RecA-like, ATP-binding domain | Domain | |
IPR049428 | RecA-like, N-terminal | Domain | |
IPR013765 | DNA recombination and repair protein RecA | Family |