7JTS | pdb_00007jts

Stalk of radial spoke 1 attached with doublet microtubule from Chlamydomonas reinhardtii

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth a]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
D [auth b]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
E [auth c]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
F [auth d]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
G [auth e]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
H [auth f]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
I [auth g]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
J [auth h]	SCOP2B Superfamily	DLC-like	8102170	3000821	SCOP2B (2022-06-29)
M [auth t]	SCOP2 Family	Calmodulin-like	8102053	4000924	SCOP2 (2022-06-29)
M [auth t]	SCOP2 Superfamily	EF-hand	8102054	3001983	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth a]	Dynein_light	e7jtsa1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
D [auth b]	Dynein_light	e7jtsb1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
E [auth c]	Dynein_light	e7jtsc1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
F [auth d]	Dynein_light	e7jtsd1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
G [auth e]	Dynein_light	e7jtse1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
H [auth f]	Dynein_light	e7jtsf1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
I [auth g]	Dynein_light	e7jtsg1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
J [auth h]	Dynein_light	e7jtsh1	A: a+b two layers	X: DLC (From Topology)	H: DLC (From Topology)	T: DLC	F: Dynein_light	ECOD (1.6)
M [auth t]	EF-hand_7_8	e7jtst2	A: alpha arrays	X: EF-hand	H: EF-hand-related	T: EF-hand	F: EF-hand_7_8	ECOD (1.6)
M [auth t]	EF-hand_7_5	e7jtst1	A: alpha arrays	X: EF-hand	H: EF-hand-related	T: EF-hand	F: EF-hand_7_5	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth E], B [auth F]	PF01221	Dynein light chain type 1 (Dynein_light)	Dynein light chain type 1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth E], B [auth F]	Radial spoke protein 3	-	positive regulation of locomotion regulation of biological process regulation of cell motility regulation of cellular process positive regulation of cilium-dependent cell motility biological regulation positive regulation of biological process regulation of cilium-dependent cell motility cilium or flagellum-dependent cell motility cilium-dependent cell motility regulation of locomotion positive regulation of cell motility cellular process cell motility positive regulation of locomotion regulation of biological process regulation of cell motility regulation of cellular process positive regulation of cilium-dependent cell motility biological regulation positive regulation of biological process regulation of cilium-dependent cell motility cilium or flagellum-dependent cell motility cilium-dependent cell motility regulation of locomotion positive regulation of cell motility cellular process cell motility locomotion positive regulation of cellular process	membrane-bounded organelle protein-containing complex intracellular anatomical structure axoneme ciliary plasm radial spoke cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure membrane-bounded organelle protein-containing complex intracellular anatomical structure axoneme ciliary plasm radial spoke cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm motile cilium
C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], H [auth f], I [auth g], J [auth h]	Dynein 8 kDa light chain, flagellar outer arm	-	organelle assembly plasma membrane bounded cell projection organization motile cilium assembly cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis cilium organization cell projection assembly organelle assembly plasma membrane bounded cell projection organization motile cilium assembly cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component organization organelle organization cellular component assembly cilium assembly cellular process cellular component organization or biogenesis cilium organization cell projection assembly microtubule-based process	membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membrane-bounded organelle intracellular anatomical structure axoneme ciliary plasm cilium intracellular membraneless organelle cytoplasmic region plasma membrane bounded cell projection cytoplasm plasma membrane bounded cell projection intracellular organelle cell projection cellular anatomical structure cytoskeleton organelle membraneless organelle cytoplasm motile cilium protein-containing complex catalytic complex dynein complex microtubule associated complex microtubule cytoskeleton polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex
K [auth m]	FAP207	-	-	cellular anatomical structure membrane acrosomal vesicle membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm cellular anatomical structure membrane acrosomal vesicle membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle
L [auth s]	FAP253	-	-	-
M [auth t]	Calmodulin	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle cytoskeleton organelle membraneless organelle intracellular membraneless organelle membrane-bounded organelle cell projection cilium motile cilium plasma membrane bounded cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth E], B [auth F]	IPR009290	Radial spoke 3	Family
C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], H [auth f], I [auth g], J [auth h]	IPR037177	Dynein light chain superfamily	Homologous Superfamily
C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], H [auth f], I [auth g], J [auth h]	IPR001372	Dynein light chain, type 1/2	Family
C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], C [auth a], D [auth b], E [auth c], F [auth d], G [auth e], H [auth f], I [auth g], J [auth h]	IPR019763	Dynein light chain, type 1/2, conserved site	Conserved Site
K [auth m]	IPR003409	MORN repeat	Repeat
K [auth m]	IPR052472	MORN repeat-containing protein 3	Family
L [auth s]	IPR037695	IQ motif and ubiquitin-like domain-containing protein	Family
M [auth t]	IPR050230	Calmodulin/Myosin light chain/Troponin C-like	Family
M [auth t]	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
M [auth t]	IPR002048	EF-hand domain	Domain
M [auth t]	IPR011992	EF-hand domain pair	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.