7JRO
Plant Mitochondrial complex IV from Vigna radiata
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
G [auth g] | SCOP2 Family | Cytochrome c oxidase subunit h | 8102300 | 4000996 | SCOP2 (2022-06-29) |
G [auth g] | SCOP2 Superfamily | Cytochrome c oxidase subunit h | 8102301 | 3000395 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth a] | PF00115 | e7jroa1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
J [auth j] | F_UNCLASSIFIED | e7jroj1 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth b] | PF00116 | e7jrob2 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF00116 | ECOD (1.6) |
B [auth b] | PF02790 | e7jrob1 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF02790 | ECOD (1.6) |
C [auth c] | PF00510 | e7jroc1 | A: alpha bundles | X: Cytochrome c oxidase subunit III-like (From Topology) | H: Cytochrome c oxidase subunit III-like (From Topology) | T: Cytochrome c oxidase subunit III-like | F: PF00510 | ECOD (1.6) |
E [auth e] | PF01215 | e7jroe1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Cytochrome c oxidase Subunit F | F: PF01215 | ECOD (1.6) |
F [auth f] | PF02046 | e7jrof1 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIa (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIa | F: PF02046 | ECOD (1.6) |
G [auth g] | PF02297 | e7jrog1 | A: few secondary structure elements | X: Cytochrome c oxidase subunit h (From Topology) | H: Cytochrome c oxidase subunit h (From Topology) | T: Cytochrome c oxidase subunit h | F: PF02297 | ECOD (1.6) |
I [auth i] | PF02238 | e7jroi1 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIa | F: PF02238 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth b] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | - | Domain |
B [auth b] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
D [auth d] | PF06592 | Protein of unknown function (DUF1138) (DUF1138) | Protein of unknown function (DUF1138) | - | Family |
E [auth e] | PF01215 | Cytochrome c oxidase subunit Vb (COX5B) | Cytochrome c oxidase subunit Vb | - | Domain |
F [auth f] | PF02046 | Cytochrome c oxidase subunit VIa (COX6A) | Cytochrome c oxidase subunit VIa | - | Family |
G [auth g] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
I [auth i] | PF02238 | Cytochrome c oxidase subunit VII (COX7a) | Cytochrome c oxidase subunit VII | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex IV (cytochrome c oxidase) | Respiratory supercomplexes III-IV |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Electron Transport Chain Supercomplexes (Respirasome) | Respiratory supercomplex III2-IV |