Annotations: 7FIL

The cryo-EM structure of the NTD2 from the X. laevis Nup358

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	AAA_lid_RFC1	e7filA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Nup358 complex, clamps	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity SUMO transferase activity transferase activity catalytic activity DNA binding binding nucleic acid binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity SUMO transferase activity transferase activity catalytic activity DNA binding binding nucleic acid binding GTPase regulator activity enzyme regulator activity enzyme activator activity GTPase activator activity molecular function activator activity nucleoside-triphosphatase regulator activity molecular function regulator activity ligase activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport establishment of localization localization intercellular transport establishment of localization in cell cellular process nuclear export establishment of protein localization NLS-bearing protein import into nucleus protein localization to nucleus cellular localization nucleocytoplasmic transport transport nuclear transport intracellular transport establishment of localization localization intercellular transport establishment of localization in cell cellular process nuclear export establishment of protein localization NLS-bearing protein import into nucleus protein localization to nucleus import into nucleus establishment of protein localization to organelle protein transport macromolecule localization protein localization to organelle protein import into nucleus intracellular protein localization intracellular protein transport RNA transport nitrogen compound transport nucleic acid transport mRNA transport establishment of RNA localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane protein-containing complex membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane protein-containing complex nuclear protein-containing complex nuclear pore cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036443	Zinc finger, RanBP2-type superfamily	Homologous Superfamily
A	IPR022011	Nup358/RanBP2 E3 ligase domain	Domain
A	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A	IPR011993	PH-like domain superfamily	Homologous Superfamily
A	IPR000156	Ran binding domain	Domain
A	IPR019734	Tetratricopeptide repeat	Repeat
A	IPR001876	Zinc finger, RanBP2-type	Domain
A	IPR045255	Ran binding protein RanBP1-like	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7FIL | pdb_00007fil

The cryo-EM structure of the NTD2 from the X. laevis Nup358

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage