Skip to main content

Crystal structure of YggS from Fusobacterium nucleatum


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPLP-binding barrel 8100232 3000273 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AIon_transe7f8eA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Ion_transECOD (v295.2)
BSybindine7f8eB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: SybindinECOD (v295.2)
CSybindine7f8eC1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: SybindinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemaseCATH (utative)
B3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemaseCATH (utative)
C3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemaseCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF01168Alanine racemase, N-terminal domain (Ala_racemase_N)Alanine racemase, N-terminal domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Pyridoxal phosphate homeostasis protein - -

InterPro: Protein Family Classification InterPro Database Homepage