7ETR | pdb_00007etr

Crystal structure of SO_1444-SO_1445 complex from Shewanella oneidensis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DParE_toxine7etrD1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: ParE_toxinECOD (1.6)
CParE_toxine7etrC1 A: a+b two layersX: RelE-likeH: RelE-like (From Topology)T: RelE-likeF: ParE_toxinECOD (1.6)
BputA_1ste7etrB1 A: alpha arraysX: HTHH: HTHT: Ribbon-helix-helixF: putA_1stECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF05016ParE toxin of type II toxin-antitoxin system, parDE (ParE_toxin)ParE toxin of type II toxin-antitoxin system, parDEParE is the toxin family of a type II toxin-antitoxin family. It is toxic towards DNA gyrase, but is neutralised by the antitoxin ParD. The family also encompasses RelE/ParE described in [2]. Domain
A, B
PF01402Ribbon-helix-helix protein, copG family (RHH_1)Ribbon-helix-helix protein, copG familyThe structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement [2]. The helix-turn-helix-like structure is involved in dimerisation and not DNA b ...The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement [2]. The helix-turn-helix-like structure is involved in dimerisation and not DNA binding as might have been expected [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Toxin module of toxin-antitoxin system RelE/StbE family- - -
A, B
Transcriptional regulator CopG family- -