Annotations: 7EP7

The complex structure of Gpsm2 and Whirlin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LysR_substrate	e7ep7A1	A: alpha arrays	X: putative RnfG subunit of electron transport complex	H: putative RnfG subunit of electron transport complex	T: Aspartate/ornithine carbamoyltransferase	F: LysR_substrate	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13181	Tetratricopeptide repeat (TPR_8)	Tetratricopeptide repeat	-	Repeat
A	PF13176	Tetratricopeptide repeat (TPR_7)	Tetratricopeptide repeat	-	Repeat
A	PF13374	Tetratricopeptide repeat (TPR_10)	Tetratricopeptide repeat	-	Repeat
A	PF13424	Tetratricopeptide repeat (TPR_12)	Tetratricopeptide repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Whirlin	identical protein binding protein binding binding	multicellular organismal process inner ear receptor cell development cell projection organization sensory organ development epidermis development auditory receptor cell stereocilium organization neuron projection development epithelial cell differentiation hair cell differentiation multicellular organism development neuron differentiation cell differentiation inner ear development anatomical structure development multicellular organismal process inner ear receptor cell development cell projection organization sensory organ development epidermis development auditory receptor cell stereocilium organization neuron projection development epithelial cell differentiation hair cell differentiation multicellular organism development neuron differentiation cell differentiation inner ear development anatomical structure development animal organ morphogenesis system development developmental process embryonic organ morphogenesis mechanoreceptor differentiation epithelium development epidermal cell differentiation ear development embryonic morphogenesis nervous system development tissue development inner ear receptor cell differentiation generation of neurons auditory receptor cell development cellular developmental process cell development embryo development cell morphogenesis cellular component organization neurogenesis cellular component organization or biogenesis auditory receptor cell morphogenesis embryonic organ development ear morphogenesis plasma membrane bounded cell projection organization animal organ development inner ear auditory receptor cell differentiation cell morphogenesis involved in neuron differentiation anatomical structure morphogenesis sensory organ morphogenesis neuron development inner ear morphogenesis cellular process inner ear receptor cell stereocilium organization animal gross anatomical part developmental process localization establishment of protein localization establishment of localization multicellular organismal-level homeostasis homeostatic process anatomical structure homeostasis tissue homeostasis retina homeostasis cerebellar cortex morphogenesis hindbrain morphogenesis cerebellar Purkinje cell layer formation cerebellar Purkinje cell layer development metencephalon development cerebellar Purkinje cell layer morphogenesis cerebellar cortex formation cerebellum morphogenesis head development brain development cerebellar cortex development cerebellum development central nervous system development anatomical structure formation involved in morphogenesis hindbrain development sensory perception of light stimulus system process sensory perception nervous system process cell junction maintenance cell junction organization cellular component maintenance paranodal junction maintenance cell-cell junction maintenance cell-cell junction organization detection of external stimulus response to stimulus detection of mechanical stimulus involved in sensory perception of sound response to mechanical stimulus response to external stimulus detection of mechanical stimulus involved in sensory perception sensory perception of mechanical stimulus detection of abiotic stimulus detection of stimulus detection of mechanical stimulus response to abiotic stimulus detection of stimulus involved in sensory perception sensory perception of sound	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection photoreceptor inner segment protein-containing complex stereocilia ankle link stereocilia ankle link complex stereocilium bundle stereocilia coupling link cluster of actin-based cell projections intracellular anatomical structure membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection photoreceptor inner segment protein-containing complex stereocilia ankle link stereocilia ankle link complex stereocilium bundle stereocilia coupling link cluster of actin-based cell projections intracellular anatomical structure intracellular membraneless organelle neuron projection actin cytoskeleton intracellular organelle stereocilium actin-based cell projection cytoskeleton stereocilium tip membraneless organelle ciliary transition zone non-motile cilium 9+0 non-motile cilium photoreceptor cell cilium photoreceptor connecting cilium cell periphery plasma membrane membrane USH2 complex cytoplasm growth cone axon distal axon site of polarized growth synapse cell junction polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex plasma membrane region periciliary membrane compartment ciliary basal body microtubule organizing center microtubule cytoskeleton
A	G-protein-signaling modulator 2	protein binding binding protein domain specific binding GTPase regulator activity enzyme regulator activity GDP-dissociation inhibitor activity nucleoside-triphosphatase regulator activity molecular function regulator activity G-protein alpha-subunit binding identical protein binding protein-containing complex binding dynein complex binding	protein localization to postsynaptic specialization membrane protein localization to postsynaptic membrane protein localization to cell periphery cellular localization protein localization to synapse biological regulation localization within membrane protein localization to membrane protein-containing complex localization neurotransmitter receptor localization to postsynaptic specialization membrane localization regulation of postsynaptic membrane neurotransmitter receptor levels macromolecule localization protein localization to organelle protein localization to postsynaptic specialization membrane protein localization to postsynaptic membrane protein localization to cell periphery cellular localization protein localization to synapse biological regulation localization within membrane protein localization to membrane protein-containing complex localization neurotransmitter receptor localization to postsynaptic specialization membrane localization regulation of postsynaptic membrane neurotransmitter receptor levels macromolecule localization protein localization to organelle cellular process protein localization to postsynapse intracellular protein localization regulation of biological quality protein localization to cell junction receptor localization to synapse positive regulation of organelle organization regulation of cytoskeleton organization regulation of cellular component organization regulation of cellular process positive regulation of cellular component organization microtubule cytoskeleton organization positive regulation of biological process positive regulation of spindle assembly membraneless organelle assembly cellular component organization cellular component biogenesis cellular component assembly positive regulation of cell cycle process cell cycle cellular component organization or biogenesis regulation of cell cycle chromosome segregation positive regulation of cellular process spindle organization cell cycle process regulation of biological process organelle assembly regulation of cell cycle process positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization regulation of microtubule-based process regulation of spindle organization regulation of cellular component biogenesis spindle assembly regulation of organelle organization positive regulation of cell cycle regulation of spindle assembly organelle organization regulation of organelle assembly microtubule-based process cytoskeleton organization regulation of microtubule cytoskeleton organization positive regulation of organelle assembly signaling cell-cell signaling cell communication regulation of mitotic spindle organization mitotic cell cycle microtubule cytoskeleton organization involved in mitosis mitotic spindle organization mitotic cell cycle process response to light stimulus response to light intensity response to stimulus response to radiation response to abiotic stimulus positive regulation of protein localization to cell periphery regulation of localization regulation of protein localization positive regulation of protein localization to cell cortex regulation of protein localization to cell periphery regulation of protein localization to cell cortex positive regulation of protein localization protein localization to cell cortex establishment of organelle localization spindle localization establishment or maintenance of cell polarity establishment of mitotic spindle localization establishment of spindle localization establishment of spindle orientation organelle localization establishment of localization in cell establishment of localization establishment of cell polarity establishment of mitotic spindle orientation maintenance of centrosome location centrosome localization microtubule organizing center localization maintenance of organelle location maintenance of location in cell maintenance of location	intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton cell periphery cell cortex cytoplasm centrosome intracellular organelle cellular anatomical structure intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton cell periphery cell cortex cytoplasm centrosome microtubule organizing center cytosol protein-containing complex raps-insc complex cell cortex region cytoplasmic region apical cortex lateral cell cortex lateral part of cell postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse plasma membrane membrane lateral plasma membrane mitotic spindle mitotic spindle pole

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR051844	Sensory Perception USH2 Complex Protein	Family
B	IPR033028	Whirlin, harmonin_N-like domain 2	Domain
B	IPR036034	PDZ superfamily	Homologous Superfamily
B	IPR047056	Whirlin, harmonin_N-like domain 1	Domain
B	IPR001478	PDZ domain	Domain
A	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A	IPR003109	GoLoco motif	Conserved Site
A	IPR019734	Tetratricopeptide repeat	Repeat
A	IPR052386	G-protein-signaling modulator	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q9P202	autosomal recessive nonsyndromic deafness 31 nonsyndromic genetic deafness Usher syndrome type 2D Usher syndrome Usher syndrome type 2 large cell medulloblastoma non-alcoholic fatty liver disease psoriasis Usher Syndrome, Type II bipolar disorder malignant mesothelioma retinitis pigmentosa invasive ductal breast carcinoma medulloblastoma Pick disease autosomal recessive nonsyndromic deafness 31 nonsyndromic genetic deafness Usher syndrome type 2D Usher syndrome Usher syndrome type 2 large cell medulloblastoma non-alcoholic fatty liver disease psoriasis Usher Syndrome, Type II bipolar disorder malignant mesothelioma retinitis pigmentosa invasive ductal breast carcinoma medulloblastoma Pick disease tuberculosis