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Structure of CCDC25-DNA complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth B]PF05670e7eofB1 A: a+b complex topologyX: Anchorless fibronectin/fibrinogen binding protein C-terminal domain (From Topology)H: Anchorless fibronectin/fibrinogen binding protein C-terminal domain (From Topology)T: Anchorless fibronectin/fibrinogen binding protein C-terminal domainF: PF05670ECOD (1.6)
D [auth A]PF05670e7eofA1 A: a+b complex topologyX: Anchorless fibronectin/fibrinogen binding protein C-terminal domain (From Topology)H: Anchorless fibronectin/fibrinogen binding protein C-terminal domain (From Topology)T: Anchorless fibronectin/fibrinogen binding protein C-terminal domainF: PF05670ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth B],
D [auth A]		PF05670NFACT protein RNA binding domain (NFACT-R_1)NFACT protein RNA binding domainThis domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from Swiss:O34693 where the N-terminal region is involved in this activity [1]. It is an RNA binding domain of the ...This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from Swiss:O34693 where the N-terminal region is involved in this activity [1]. It is an RNA binding domain of the NFACT (NEMF, FbpA, Caliban, and Tae2) proteins. This NFACT-R family is found in two eukaryotic gene contexts: fused to the NFACT-N and NFACT-C domains in the NFACT protein involved in the ribosomal quality control pathway which contributes to CAT-tailing and as a standalone domain [2]. Additionally this domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]DNA (5'-D(*GP*AP*TP*CP*TP*AP*CP*TP*AP*GP*TP*GP*AP*TP*CP*T)-3')---
B [auth D]DNA (5'-D(*CP*AP*GP*AP*TP*CP*AP*CP*TP*AP*GP*TP*AP*GP*AP*T)-3')---
C [auth B],
D [auth A]		Coiled-coil domain-containing protein 25

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth B],
D [auth A]		IPR008532NFACT, RNA-binding domainDomain
C [auth B],
D [auth A]		IPR039730Jlp2/Ccd25Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth B],
D [auth A]		Pharos:  Q86WR0