7EI1 | pdb_00007ei1

Structure of Pyrococcus furiosus Cas1Cas2 complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
Q [auth K]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
R [auth L]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
S [auth M]SCOP2 FamilyCRISPR associated protein Cas1 8105755 4006578 SCOP2 (2022-06-29)
S [auth M]SCOP2 SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2 (2022-06-29)
T [auth N]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
U [auth I]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
V [auth J]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
W [auth O]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
X [auth P]SCOP2B SuperfamilyCRISPR associated protein Cas1 8105756 3002164 SCOP2B (2022-06-29)
I [auth Q]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
J [auth R]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
K [auth S]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
L [auth T]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
M [auth U]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
N [auth V]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)
O [auth W]SCOP2 FamilyCas2 major variant-like 8105757 4003727 SCOP2 (2022-06-29)
O [auth W]SCOP2 SuperfamilyCas2-like 8105758 3001363 SCOP2 (2022-06-29)
P [auth X]SCOP2B SuperfamilyCas2-like 8105758 3001363 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AReovirus_L2_MT2e7ei1A1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
BReovirus_L2_MT2e7ei1B1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
CReovirus_L2_MT2e7ei1C1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
DReovirus_L2_MT2e7ei1D1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
EReovirus_L2_MT2e7ei1E1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
FReovirus_L2_MT2e7ei1F1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
GReovirus_L2_MT2e7ei1G1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
HReovirus_L2_MT2e7ei1H1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
Q [auth K]Reovirus_L2_MT2e7ei1K1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
R [auth L]Reovirus_L2_MT2e7ei1L1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
S [auth M]Reovirus_L2_MT2e7ei1M1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
T [auth N]Reovirus_L2_MT2e7ei1N1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
U [auth I]Reovirus_L2_MT2e7ei1I1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
V [auth J]Reovirus_L2_MT2e7ei1J1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
W [auth O]Reovirus_L2_MT2e7ei1O1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
X [auth P]Reovirus_L2_MT2e7ei1P1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
I [auth Q]Reovirus_L2_MT2e7ei1Q1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
J [auth R]Reovirus_L2_MT2e7ei1R1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
K [auth S]Reovirus_L2_MT2e7ei1S1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
L [auth T]Reovirus_L2_MT2e7ei1T1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
M [auth U]Reovirus_L2_MT2e7ei1U1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
N [auth V]Reovirus_L2_MT2e7ei1V1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
O [auth W]Reovirus_L2_MT2e7ei1W1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)
P [auth X]Reovirus_L2_MT2e7ei1X1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: CNF1/YfiH-like putative cysteine hydrolasesT: CNF1/YfiH-like putative cysteine hydrolasesF: Reovirus_L2_MT2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
A1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
B3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
B1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
C3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
C1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
D3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
D1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
E3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
E1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
F3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
F1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
G3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
G1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
H3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
H1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
Q [auth K]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
Q [auth K]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
R [auth L]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
R [auth L]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
S [auth M]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
S [auth M]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
T [auth N]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
T [auth N]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
U [auth I]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
V [auth J]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
V [auth J]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)
W [auth O]3.100.10.20 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (utative)
W [auth O]1.20.120.920 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CRISPR-associated endonuclease Cas1, C-terminal domainCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
CRISPR-associated endonuclease Cas1 -
CRISPR-associated endoribonuclease Cas2 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR002729CRISPR-associated protein Cas1Family
A,
B,
C,
D,
E,
IPR042206CRISPR-associated endonuclease Cas1, C-terminal domainHomologous Superfamily
A,
B,
C,
D,
E,
IPR042211CRISPR-associated endonuclease Cas1, N-terminal domainHomologous Superfamily
A,
B,
C,
D,
E,
IPR019858CRISPR-associated protein Cas1, HMARI/TNEAP subtypeFamily
IPR019199Virulence-associated protein D / CRISPR associated protein Cas2Family
IPR021127CRISPR-associated endonuclease Cas2Family