7E2C
Monomer of TRAPPII (open)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8065542 | 3001668 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8065542 | 3001668 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SNARE-like | 8090321 | 3001113 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Sedlin_N | e7e2cA1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sedlin_N | ECOD (1.6) |
K | F_UNCLASSIFIED | e7e2cK2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | TRAPP | e7e2cB1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
C | TRAPP | e7e2cC1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
F | TRAPP | e7e2cF1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
D | Sybindin | e7e2cD1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sybindin | ECOD (1.6) |
E | Sybindin | e7e2cE1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sybindin | ECOD (1.6) |
G | TRAPP | e7e2cG1 | A: a+b complex topology | X: H-NOX domain (From Topology) | H: H-NOX domain (From Topology) | T: H-NOX domain | F: TRAPP | ECOD (1.6) |
H | Sedlin_N | e7e2cH1 | A: a+b three layers | X: Profilin-like | H: profilin-like (From Topology) | T: profilin-like | F: Sedlin_N | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04628 | Sedlin, N-terminal conserved region (Sedlin_N) | Sedlin, N-terminal conserved region | - | Family | |
PF12735 | TRAPP trafficking subunit Trs65 (Trs65) | TRAPP trafficking subunit Trs65 | - | Family | |
PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family | |
PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family | |
PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
PF04628 | Sedlin, N-terminal conserved region (Sedlin_N) | Sedlin, N-terminal conserved region | - | Family | |
PF12584 | Trafficking protein particle complex subunit 10, TRAPPC10 (TRAPPC10) | Trafficking protein particle complex subunit 10, TRAPPC10 | - | Family | |