PA28alpha-beta in complex with immunoproteasome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| R [auth d] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064052 | 3000131 | SCOP2B (2022-06-29) |
| G [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064052 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth c] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099416 | 3000131 | SCOP2B (2022-06-29) |
| F [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099416 | 3000131 | SCOP2B (2022-06-29) |
| P [auth b] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099576 | 3000131 | SCOP2B (2022-06-29) |
| E [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099576 | 3000131 | SCOP2B (2022-06-29) |
| O [auth a] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064008 | 3000131 | SCOP2B (2022-06-29) |
| D [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064008 | 3000131 | SCOP2B (2022-06-29) |
| U [auth g] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099430 | 3000131 | SCOP2B (2022-06-29) |
| C [auth N] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099430 | 3000131 | SCOP2B (2022-06-29) |
| T [auth f] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099420 | 3000131 | SCOP2B (2022-06-29) |
| B [auth M] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8099420 | 3000131 | SCOP2B (2022-06-29) |
| IA [auth 2] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102457 | 3000131 | SCOP2B (2022-06-29) |
| FA [auth Y] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102457 | 3000131 | SCOP2B (2022-06-29) |
| HA [auth 1] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102455 | 3000131 | SCOP2B (2022-06-29) |
| EA [auth X] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102455 | 3000131 | SCOP2B (2022-06-29) |
| GA [auth Z] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102453 | 3000131 | SCOP2B (2022-06-29) |
| DA [auth W] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8102453 | 3000131 | SCOP2B (2022-06-29) |
| X [auth J] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079514 | 3000131 | SCOP2B (2022-06-29) |
| BA [auth U] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079514 | 3000131 | SCOP2B (2022-06-29) |
| S [auth e] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8039672 | 3000131 | SCOP2B (2022-06-29) |
| A [auth L] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8039672 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| N [auth G] | PA28_beta | e7dr6G1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| L [auth E] | PA28_beta | e7dr6E1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| J [auth C] | PA28_beta | e7dr6C1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| I [auth B] | PA28_beta | e7dr6B1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| M [auth F] | PA28_beta | e7dr6F1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| K [auth D] | PA28_beta | e7dr6D1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| H [auth A] | PA28_beta | e7dr6A1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Proteasome activator reg(alpha) (From Topology) | T: Proteasome activator reg(alpha) | F: PA28_beta | ECOD (1.6) |
| R [auth d] | Proteasome | e7dr6d1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| G [auth R] | Proteasome | e7dr6R1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Q [auth c] | Proteasome | e7dr6c1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| F [auth Q] | Proteasome | e7dr6Q1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| P [auth b] | Proteasome | e7dr6b1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| E [auth P] | Proteasome | e7dr6P1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| O [auth a] | Proteasome | e7dr6a1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| D [auth O] | Proteasome | e7dr6O1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| U [auth g] | Proteasome | e7dr6g1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| C [auth N] | Proteasome | e7dr6N1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| T [auth f] | Proteasome | e7dr6f1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| B [auth M] | Proteasome | e7dr6M1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| IA [auth 2] | Proteasome | e7dr621 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| FA [auth Y] | Proteasome | e7dr6Y1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| HA [auth 1] | Proteasome | e7dr611 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| EA [auth X] | Proteasome | e7dr6X1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| GA [auth Z] | Proteasome | e7dr6Z1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| DA [auth W] | Proteasome | e7dr6W1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Y [auth K] | Proteasome | e7dr6K1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| CA [auth V] | Proteasome | e7dr6V1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| X [auth J] | Proteasome | e7dr6J1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| BA [auth U] | Proteasome | e7dr6U1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| W [auth I] | Proteasome | e7dr6I1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| AA [auth T] | Proteasome | e7dr6T1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| Z [auth S] | Proteasome | e7dr6S1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| V [auth H] | Proteasome | e7dr6H1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| S [auth e] | Proteasome | e7dr6e1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
| A [auth L] | Proteasome | e7dr6L1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: Proteasome | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth B], J [auth C], L [auth E], N [auth G] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| I [auth B], J [auth C], L [auth E], N [auth G] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| I [auth B], J [auth C], L [auth E], N [auth G] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
| I [auth B], J [auth C], L [auth E], N [auth G] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
| H [auth A], K [auth D], M [auth F] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| H [auth A], K [auth D], M [auth F] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| H [auth A], K [auth D], M [auth F] | PF02252 | Proteasome activator PA28, C-terminal (PA28_C) | Proteasome activator PA28, C-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a the C-terminal domain found in PA28 subunits, including PA28alpha/b ... | Domain |
| H [auth A], K [auth D], M [auth F] | PF02251 | Proteasome activator PA28, N-terminal (PA28_N) | Proteasome activator PA28, N-terminal | Proteasome activator 28 (PA28), also known as 11s regulator of REG, binds to the 20S proteasome and simulates peptidase activity in an ATP-independent manner. This entry represents a single alpha-helix N-terminal domain found in PA28 subunits, includ ... | Domain |
| G [auth R], R [auth d] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G [auth R], R [auth d] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| F [auth Q], Q [auth c] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| F [auth Q], Q [auth c] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| E [auth P], P [auth b] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| E [auth P], P [auth b] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| D [auth O], O [auth a] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| D [auth O], O [auth a] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| C [auth N], U [auth g] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| C [auth N], U [auth g] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| B [auth M], T [auth f] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| EA [auth X], HA [auth 1] | PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family |
| CA [auth V], Y [auth K] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| BA [auth U], X [auth J] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| AA [auth T], W [auth I] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| V [auth H], Z [auth S] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A [auth L], S [auth e] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A [auth L], S [auth e] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
| Chains | Drug Target   | Associated Disease |
|---|---|---|
| I [auth B], J [auth C], L [auth E], N [auth G] | :  Q06323 | |
| H [auth A], K [auth D], M [auth F] | :  Q9UL46 |














