7DR2 | pdb_00007dr2

Structure of GraFix PSI tetramer from Cyanophora paradoxa


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
S [auth bJ]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106563 3000824 SCOP2B (2022-06-29)
NA [auth dJ]SCOP2 FamilySubunit IX of photosystem I reaction centre, PsaJ 8106562 4002101 SCOP2 (2022-06-29)
NA [auth dJ]SCOP2 SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106563 3000824 SCOP2 (2022-06-29)
H [auth aJ]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106563 3000824 SCOP2B (2022-06-29)
CA [auth cJ]SCOP2B SuperfamilySubunit IX of photosystem I reaction centre, PsaJ 8106563 3000824 SCOP2B (2022-06-29)
R [auth bI]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106561 3000819 SCOP2B (2022-06-29)
MA [auth dI]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106561 3000819 SCOP2B (2022-06-29)
G [auth aI]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106561 3000819 SCOP2B (2022-06-29)
BA [auth cI]SCOP2B SuperfamilySubunit VIII of photosystem I reaction centre, PsaI 8106561 3000819 SCOP2B (2022-06-29)
Q [auth bF]SCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106559 3000813 SCOP2B (2022-06-29)
LA [auth dF]SCOP2 FamilySubunit III of photosystem I reaction centre, PsaF 8106558 4002091 SCOP2 (2022-06-29)
LA [auth dF]SCOP2 SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106559 3000813 SCOP2 (2022-06-29)
F [auth aF]SCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106559 3000813 SCOP2B (2022-06-29)
AA [auth cF]SCOP2B SuperfamilySubunit III of photosystem I reaction centre, PsaF 8106559 3000813 SCOP2B (2022-06-29)
Z [auth cE]SCOP2B SuperfamilyElectron transport accessory proteins 8106557 3000325 SCOP2B (2022-06-29)
P [auth bE]SCOP2B SuperfamilyElectron transport accessory proteins 8106557 3000325 SCOP2B (2022-06-29)
KA [auth dE]SCOP2B SuperfamilyElectron transport accessory proteins 8106557 3000325 SCOP2B (2022-06-29)
E [auth aE]SCOP2B SuperfamilyElectron transport accessory proteins 8106557 3000325 SCOP2B (2022-06-29)
Y [auth cD]SCOP2B SuperfamilyPhotosystem I subunit PsaD 8106639 3000951 SCOP2B (2022-06-29)
O [auth bD]SCOP2B SuperfamilyPhotosystem I subunit PsaD 8106639 3000951 SCOP2B (2022-06-29)
JA [auth dD]SCOP2 FamilyPhotosystem I subunit PsaD 8106638 4003498 SCOP2 (2022-06-29)
JA [auth dD]SCOP2 SuperfamilyPhotosystem I subunit PsaD 8106639 3000951 SCOP2 (2022-06-29)
D [auth aD]SCOP2B SuperfamilyPhotosystem I subunit PsaD 8106639 3000951 SCOP2B (2022-06-29)
X [auth cC]SCOP2 Family7-Fe ferredoxin 8106552 4001227 SCOP2 (2022-06-29)
X [auth cC]SCOP2 Superfamily4Fe-4S ferredoxins 8106553 3000020 SCOP2 (2022-06-29)
N [auth bC]SCOP2B Superfamily4Fe-4S ferredoxins 8106553 3000020 SCOP2B (2022-06-29)
IA [auth dC]SCOP2B Superfamily4Fe-4S ferredoxins 8106553 3000020 SCOP2B (2022-06-29)
C [auth aC]SCOP2B Superfamily4Fe-4S ferredoxins 8106553 3000020 SCOP2B (2022-06-29)
W [auth cB]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106555 3000850 SCOP2B (2022-06-29)
M [auth bB]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106555 3000850 SCOP2B (2022-06-29)
HA [auth dB]SCOP2 FamilyPhotosystem I subunits PsaA/PsaB 8106554 4002118 SCOP2 (2022-06-29)
HA [auth dB]SCOP2 SuperfamilyPhotosystem I subunits PsaA/PsaB 8106555 3000850 SCOP2 (2022-06-29)
B [auth aB]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106555 3000850 SCOP2B (2022-06-29)
U [auth bM]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre, PsaM 8106565 3000829 SCOP2B (2022-06-29)
PA [auth dM]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre, PsaM 8106565 3000829 SCOP2B (2022-06-29)
K [auth aM]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre, PsaM 8106565 3000829 SCOP2B (2022-06-29)
FA [auth cM]SCOP2B SuperfamilySubunit XII of photosystem I reaction centre, PsaM 8106565 3000829 SCOP2B (2022-06-29)
V [auth cA]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106471 3000850 SCOP2B (2022-06-29)
L [auth bA]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106471 3000850 SCOP2B (2022-06-29)
GA [auth dA]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106471 3000850 SCOP2B (2022-06-29)
A [auth aA]SCOP2B SuperfamilyPhotosystem I subunits PsaA/PsaB 8106471 3000850 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth aK]GST_Ce7dr2aK1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GST_CECOD (develop294)
DA [auth cK]CoV_NSP8e7dr2cK1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
S [auth bJ]CoV_NSP8e7dr2bJ1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
NA [auth dJ]CoV_NSP8e7dr2dJ1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
H [auth aJ]CoV_NSP8e7dr2aJ1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
CA [auth cJ]CoV_NSP8e7dr2cJ1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
R [auth bI]CoV_NSP8e7dr2bI1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
MA [auth dI]CoV_NSP8e7dr2dI1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
G [auth aI]CoV_NSP8e7dr2aI1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
BA [auth cI]CoV_NSP8e7dr2cI1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
Q [auth bF]CoV_NSP8e7dr2bF1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
LA [auth dF]CoV_NSP8e7dr2dF1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
F [auth aF]CoV_NSP8e7dr2aF1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
AA [auth cF]CoV_NSP8e7dr2cF1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
Z [auth cE]CoV_NSP8e7dr2cE1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
P [auth bE]CoV_NSP8e7dr2bE1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
KA [auth dE]CoV_NSP8e7dr2dE1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
E [auth aE]CoV_NSP8e7dr2aE1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
Y [auth cD]CoV_NSP8e7dr2cD1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
O [auth bD]CoV_NSP8e7dr2bD1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
JA [auth dD]CoV_NSP8e7dr2dD1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
D [auth aD]CoV_NSP8e7dr2aD1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
X [auth cC]CoV_NSP8e7dr2cC1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
N [auth bC]CoV_NSP8e7dr2bC1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
IA [auth dC]CoV_NSP8e7dr2dC1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
C [auth aC]CoV_NSP8e7dr2aC1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
W [auth cB]CoV_NSP8e7dr2cB1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
M [auth bB]CoV_NSP8e7dr2bB1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
HA [auth dB]CoV_NSP8e7dr2dB1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
B [auth aB]CoV_NSP8e7dr2aB1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
U [auth bM]CoV_NSP8e7dr2bM1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
PA [auth dM]CoV_NSP8e7dr2dM1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
K [auth aM]CoV_NSP8e7dr2aM1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
FA [auth cM]CoV_NSP8e7dr2cM1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
T [auth bL]CoV_NSP8e7dr2bL1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
OA [auth dL]CoV_NSP8e7dr2dL1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
J [auth aL]CoV_NSP8e7dr2aL1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
EA [auth cL]CoV_NSP8e7dr2cL1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
V [auth cA]CoV_NSP8e7dr2cA1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
L [auth bA]CoV_NSP8e7dr2bA1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
GA [auth dA]CoV_NSP8e7dr2dA1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)
A [auth aA]CoV_NSP8e7dr2aA1 A: alpha bundlesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: CoV_NSP8ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DA [auth cK],
I [auth aK]
Photosystem I reaction center subunit PsaK 1---
CA [auth cJ],
H [auth aJ],
NA [auth dJ],
S [auth bJ]
Photosystem I reaction center subunit IX-
BA [auth cI],
G [auth aI],
MA [auth dI],
R [auth bI]
Photosystem I reaction center subunit VIII-
AA [auth cF],
F [auth aF],
LA [auth dF],
Q [auth bF]
Photosystem I reaction center subunit III-
E [auth aE],
KA [auth dE],
P [auth bE],
Z [auth cE]
Photosystem I reaction center subunit IV-
D [auth aD],
JA [auth dD],
O [auth bD],
Y [auth cD]
Photosystem I reaction center subunit II, cyanelle-
C [auth aC],
IA [auth dC],
N [auth bC],
X [auth cC]
Photosystem I iron-sulfur center
B [auth aB],
HA [auth dB],
M [auth bB],
W [auth cB]
Photosystem I P700 chlorophyll a apoprotein A2
FA [auth cM],
K [auth aM],
PA [auth dM],
U [auth bM]
Photosystem I reaction center subunit XII-
EA [auth cL],
J [auth aL],
OA [auth dL],
T [auth bL]
Photosystem I reaction center subunit XI---
A [auth aA],
GA [auth dA],
L [auth bA],
V [auth cA]
Photosystem I P700 chlorophyll a apoprotein A1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
CA [auth cJ],
H [auth aJ],
NA [auth dJ],
S [auth bJ]
IPR002615Photosystem I PsaJ, reaction centre subunit IXFamily
CA [auth cJ],
H [auth aJ],
NA [auth dJ],
S [auth bJ]
IPR036062Photosystem I PsaJ, reaction centre subunit IX superfamilyHomologous Superfamily
BA [auth cI],
G [auth aI],
MA [auth dI],
R [auth bI]
IPR036357Photosystem I reaction centre subunit VIII superfamilyHomologous Superfamily
BA [auth cI],
G [auth aI],
MA [auth dI],
R [auth bI]
IPR001302Photosystem I reaction centre subunit VIIIFamily
AA [auth cF],
F [auth aF],
LA [auth dF],
Q [auth bF]
IPR036577Photosystem I PsaF, reaction centre subunit III superfamilyHomologous Superfamily
AA [auth cF],
F [auth aF],
LA [auth dF],
Q [auth bF]
IPR003666Photosystem I PsaF, reaction centre subunit IIIFamily
E [auth aE],
KA [auth dE],
P [auth bE],
Z [auth cE]
IPR008990Electron transport accessory-like domain superfamilyHomologous Superfamily
E [auth aE],
KA [auth dE],
P [auth bE],
Z [auth cE]
IPR003375Photosystem I PsaE, reaction centre subunit IVFamily
D [auth aD],
JA [auth dD],
O [auth bD],
Y [auth cD]
IPR003685Photosystem I PsaDFamily
D [auth aD],
JA [auth dD],
O [auth bD],
Y [auth cD]
IPR036579Photosystem I, reaction centre subunit PsaD superfamilyHomologous Superfamily
C [auth aC],
IA [auth dC],
N [auth bC],
X [auth cC]
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
C [auth aC],
IA [auth dC],
N [auth bC],
X [auth cC]
IPR050157Photosystem I iron-sulfur centerFamily
C [auth aC],
IA [auth dC],
N [auth bC],
X [auth cC]
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
C [auth aC],
IA [auth dC],
N [auth bC],
X [auth cC]
IPR017491Photosystem I protein PsaCFamily
B [auth aB],
HA [auth dB],
M [auth bB],
W [auth cB]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
B [auth aB],
HA [auth dB],
M [auth bB],
W [auth cB]
IPR001280Photosystem I PsaA/PsaBFamily
B [auth aB],
HA [auth dB],
M [auth bB],
W [auth cB]
IPR006244Photosystem I PsaBFamily
B [auth aB],
HA [auth dB],
M [auth bB],
W [auth cB]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site
FA [auth cM],
K [auth aM],
PA [auth dM],
U [auth bM]
IPR010010Photosystem I PsaM, reaction centreFamily
FA [auth cM],
K [auth aM],
PA [auth dM],
U [auth bM]
IPR037279Photosystem I PsaM, reaction centre superfamilyHomologous Superfamily
A [auth aA],
GA [auth dA],
L [auth bA],
V [auth cA]
IPR036408Photosystem I PsaA/PsaB superfamilyHomologous Superfamily
A [auth aA],
GA [auth dA],
L [auth bA],
V [auth cA]
IPR001280Photosystem I PsaA/PsaBFamily
A [auth aA],
GA [auth dA],
L [auth bA],
V [auth cA]
IPR006243Photosystem I PsaAFamily
A [auth aA],
GA [auth dA],
L [auth bA],
V [auth cA]
IPR020586Photosystem I PsaA/PsaB, conserved siteConserved Site