7DOH | pdb_00007doh

Crystal Structure of GD-26 Fab in Complex with TD Peptide from Haloarcula Marismortui Bacteriorhodopsin I

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth H]Ion_trans, Ion_trans_2e7dohH1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Ion_trans, Ion_trans_2ECOD (v295.2)
B [auth L]Ion_trans, Ion_trans_2e7dohL1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: Ion_trans, Ion_trans_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth H]Heavy ChainIGHV1 -gly-thr-gly-ala-thr-pro-ala-asp-aspSAbDab (2026-09-11)
B [auth L]Light ChainIGKV1 Kappagly-thr-gly-ala-thr-pro-ala-asp-aspSAbDab (2026-09-11)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth H]GD-26 Fab H-chain---
B [auth L]GD-26 Fab L-chain---
A [auth I]GLY-THR-GLY-ALA-THR-PRO-ALA-ASP-ASP -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth I]IPR018229Rhodopsin, retinal binding siteBinding Site
A [auth I]IPR001425Archaeal/bacterial/fungal rhodopsinsFamily