7DOD
Capsid structure of human sapovirus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth B] | F_UNCLASSIFIED | e7dodB3 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth B] | PF00915 | e7dodB2 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF00915 | ECOD (1.6) |
C [auth B] | PF00915 | e7dodB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
A [auth C] | F_UNCLASSIFIED | e7dodC3 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: F_UNCLASSIFIED | ECOD (1.6) |
A [auth C] | PF00915 | e7dodC2 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF00915 | ECOD (1.6) |
A [auth C] | PF00915 | e7dodC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e7dodA3 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | PF00915 | e7dodA2 | A: beta barrels | X: cradle loop barrel | H: Capsid protein protrusion (P) domain (From Topology) | T: Capsid protein protrusion (P) domain | F: PF00915 | ECOD (1.6) |
B [auth A] | PF00915 | e7dodA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00915 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A], C [auth B] | PF00915 | Calicivirus coat protein (Calici_coat) | Calicivirus coat protein | - | Family |