7DL8 | pdb_00007dl8

Crystal structure of ALBA1 from Trypanosoma brucei

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d7dl8c_	Alpha and beta proteins (a+b)	IF3-like	AlbA-like	automated matches	automated matches	(Trypanosoma brucei ) [TaxId: 5691 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Alba	e7dl8D1	A: a+b two layers	X: IF3-like	H: AlbA-like (From Topology)	T: AlbA-like	F: Alba	ECOD (1.6)
C	Alba	e7dl8C1	A: a+b two layers	X: IF3-like	H: AlbA-like (From Topology)	T: AlbA-like	F: Alba	ECOD (1.6)
B	Alba	e7dl8B1	A: a+b two layers	X: IF3-like	H: AlbA-like (From Topology)	T: AlbA-like	F: Alba	ECOD (1.6)
A	Alba	e7dl8A1	A: a+b two layers	X: IF3-like	H: AlbA-like (From Topology)	T: AlbA-like	F: Alba	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.110.20	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Alba-like domain	CATH (utative)
C	3.30.110.20	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Alba-like domain	CATH (utative)
B	3.30.110.20	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Alba-like domain	CATH (utative)
A	3.30.110.20	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Alba-like domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01918	Alba (Alba)	Alba	Alba is a novel chromosomal protein that coats archaeal DNA without compacting it.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	ALBA-Domain Protein	RNA binding binding nucleic acid binding mRNA binding	-	intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036882	Alba-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	Family
A, B, C, D	IPR002775	DNA/RNA-binding protein Alba-like	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.