7DKF
Activity optimized supercomplex state4
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth C1] | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038264 | 3000966 | SCOP2B (2022-06-29) |
C [auth C1] | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8038265 | 3000517 | SCOP2B (2022-06-29) |
N [auth O1] | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038264 | 3000966 | SCOP2B (2022-06-29) |
N [auth O1] | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8038265 | 3000517 | SCOP2B (2022-06-29) |
D [auth D1] | SCOP2B Superfamily | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor | 8038268 | 3000762 | SCOP2B (2022-06-29) |
D [auth D1] | SCOP2B Superfamily | Cytochrome c | 8038266 | 3000815 | SCOP2B (2022-06-29) |
O [auth P1] | SCOP2B Superfamily | Cytochrome c | 8038266 | 3000815 | SCOP2B (2022-06-29) |
O [auth P1] | SCOP2B Superfamily | Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) transmembrane anchor | 8038268 | 3000762 | SCOP2B (2022-06-29) |
E [auth E1] | SCOP2B Superfamily | ISP transmembrane anchor | 8038269 | 3000753 | SCOP2B (2022-06-29) |
P [auth Q1] | SCOP2B Superfamily | ISP transmembrane anchor | 8038269 | 3000753 | SCOP2B (2022-06-29) |
P [auth Q1] | SCOP2B Superfamily | ISP domain | 8038267 | 3000233 | SCOP2B (2022-06-29) |
W [auth 22] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8054161 | 3002280 | SCOP2B (2022-06-29) |
W [auth 22] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8047671 | 3002280 | SCOP2B (2022-06-29) |
Z [auth 52] | SCOP2B Superfamily | NADH-quinone oxidoreductase subunit 11-like | 8053511 | 3002200 | SCOP2B (2022-06-29) |
EA [auth B2] | SCOP2B Superfamily | HydB/Nqo4-like | 8098540 | 3001849 | SCOP2B (2022-06-29) |
SA [auth Q2] | SCOP2B Superfamily | CHCH-like | 8093194 | 3002691 | SCOP2B (2022-06-29) |
SA [auth Q2] | SCOP2B Superfamily | CHCH-like | 8093195 | 3002691 | SCOP2B (2022-06-29) |
UB [auth F3] | SCOP2B Superfamily | Rubredoxin-like | 8035432 | 3001257 | SCOP2B (2022-06-29) |
VB [auth G3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIa | 8035433 | 3000592 | SCOP2B (2022-06-29) |
XB [auth I3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIc | 8035437 | 3000598 | SCOP2B (2022-06-29) |
A [auth A1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038259 | 3001831 | SCOP2B (2022-06-29) |
A [auth A1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038258 | 3001831 | SCOP2B (2022-06-29) |
L [auth M1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038258 | 3001831 | SCOP2B (2022-06-29) |
L [auth M1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038259 | 3001831 | SCOP2B (2022-06-29) |
J [auth J1] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8037844 | 3000779 | SCOP2B (2022-06-29) |
U [auth V1] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8037844 | 3000779 | SCOP2B (2022-06-29) |
X [auth 32] | SCOP2B Superfamily | NADH-quinone oxidoreductase subunit 11-like | 8106703 | 3002200 | SCOP2B (2022-06-29) |
Y [auth 42] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8054157 | 3002280 | SCOP2B (2022-06-29) |
Y [auth 42] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8048502 | 3002280 | SCOP2B (2022-06-29) |
AA [auth 72] | SCOP2B Superfamily | NADH-quinone oxidoreductase subunit 11-like | 8053516 | 3002200 | SCOP2B (2022-06-29) |
CA [auth 92] | SCOP2B Superfamily | Thioredoxin-like | 8085749 | 3000031 | SCOP2B (2022-06-29) |
B [auth B1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038260 | 3001831 | SCOP2B (2022-06-29) |
B [auth B1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038263 | 3001831 | SCOP2B (2022-06-29) |
M [auth N1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038263 | 3001831 | SCOP2B (2022-06-29) |
M [auth N1] | SCOP2B Superfamily | LuxS/MPP-like metallohydrolase | 8038260 | 3001831 | SCOP2B (2022-06-29) |
GA [auth D2] | SCOP2B Superfamily | Nqo6/HydA N-terminal domain-like | 8085723 | 3002291 | SCOP2B (2022-06-29) |
JA [auth G2] | SCOP2B Superfamily | NADH-ubiquinone oxidoreductase-like | 8053978 | 3002258 | SCOP2B (2022-06-29) |
LA [auth I2] | SCOP2B Superfamily | Rubredoxin-like | 8091045 | 3001257 | SCOP2B (2022-06-29) |
NA [auth K2] | SCOP2B Superfamily | Thioredoxin-like | 8065221 | 3000031 | SCOP2B (2022-06-29) |
OB [auth M2] | SCOP2B Superfamily | ACP-like | 8074642 | 3001805 | SCOP2B (2022-06-29) |
YA [auth W2] | SCOP2B Superfamily | ACP-like | 8074642 | 3001805 | SCOP2B (2022-06-29) |
HB [auth h2] | SCOP2B Superfamily | ESSS subunit of respiratory complex I | 8090228 | 3002418 | SCOP2B (2022-06-29) |
KB [auth 12] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8054147 | 3002280 | SCOP2B (2022-06-29) |
LB [auth 62] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8048259 | 3002280 | SCOP2B (2022-06-29) |
LB [auth 62] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8047666 | 3002280 | SCOP2B (2022-06-29) |
PB [auth A3] | SCOP2B Superfamily | Cytochrome c oxidase subunit I-like | 8035426 | 3000653 | SCOP2B (2022-06-29) |
QB [auth B3] | SCOP2B Superfamily | Cytochrome c oxidase subunit II-like transmembrane region | 8035428 | 3000692 | SCOP2B (2022-06-29) |
QB [auth B3] | SCOP2B Superfamily | Cupredoxins | 8035427 | 3000886 | SCOP2B (2022-06-29) |
RB [auth C3] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8035429 | 3000671 | SCOP2B (2022-06-29) |
SB [auth D3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit IV | 8035430 | 3000582 | SCOP2B (2022-06-29) |
F [auth F1] | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038272 | 3000797 | SCOP2B (2022-06-29) |
Q [auth R1] | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038272 | 3000797 | SCOP2B (2022-06-29) |
TB [auth E3] | SCOP2B Superfamily | Cytochrome c oxidase subunit E | 8035431 | 3001402 | SCOP2B (2022-06-29) |
WB [auth H3] | SCOP2B Superfamily | Cytochrome c oxidase subunit h | 8035435 | 3000395 | SCOP2B (2022-06-29) |
YB [auth J3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIa | 8035438 | 3000606 | SCOP2B (2022-06-29) |
ZB [auth K3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIb | 8035440 | 3000613 | SCOP2B (2022-06-29) |
AC [auth L3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | 8035441 | 3000624 | SCOP2B (2022-06-29) |
BC [auth M3] | SCOP2B Superfamily | Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) | 8035443 | 3000633 | SCOP2B (2022-06-29) |
G [auth G1] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038274 | 3000770 | SCOP2B (2022-06-29) |
R [auth S1] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038274 | 3000770 | SCOP2B (2022-06-29) |
H [auth H1] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038275 | 3000806 | SCOP2B (2022-06-29) |
S [auth T1] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8038275 | 3000806 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth C1] | Cytochrom_B_C | e7dkfC12 | A: alpha bundles | X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: Cytochrom_B_C | ECOD (1.6) |
C [auth C1] | Cytochrome_B | e7dkfC11 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cytochrome_B | ECOD (1.6) |
N [auth O1] | Cytochrom_B_C | e7dkfO12 | A: alpha bundles | X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: Cytochrom_B_C | ECOD (1.6) |
N [auth O1] | Cytochrome_B | e7dkfO11 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cytochrome_B | ECOD (1.6) |
D [auth D1] | Cytochrom_C1_N | e7dkfD11 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrom_C1_N | ECOD (1.6) |
D [auth D1] | Cytochrom_C1_C | e7dkfD12 | A: extended segments | X: cytochrome c1 transmembrane anchor (From Topology) | H: cytochrome c1 transmembrane anchor (From Topology) | T: cytochrome c1 transmembrane anchor | F: Cytochrom_C1_C | ECOD (1.6) |
O [auth P1] | Cytochrom_C1_N | e7dkfP12 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrom_C1_N | ECOD (1.6) |
O [auth P1] | Cytochrom_C1_C | e7dkfP11 | A: extended segments | X: cytochrome c1 transmembrane anchor (From Topology) | H: cytochrome c1 transmembrane anchor (From Topology) | T: cytochrome c1 transmembrane anchor | F: Cytochrom_C1_C | ECOD (1.6) |
E [auth E1] | UCR_TM | e7dkfE11 | A: extended segments | X: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | T: iron-sulfur subunit (ISP) transmembrane anchor | F: UCR_TM | ECOD (1.6) |
P [auth Q1] | Rieske_cytochrome_bc1,Rieske_6 | e7dkfQ12 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: Rieske_cytochrome_bc1,Rieske_6 | ECOD (1.6) |
P [auth Q1] | UCR_TM | e7dkfQ11 | A: extended segments | X: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | T: iron-sulfur subunit (ISP) transmembrane anchor | F: UCR_TM | ECOD (1.6) |
I [auth I1] | Ubiq-Cytc-red_N | e7dkfI11 | A: extended segments | X: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology) | H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology) | T: Ubiquinol-cytochrome c reductase 8 kDa protein | F: Ubiq-Cytc-red_N | ECOD (1.6) |
T [auth U1] | Ubiq-Cytc-red_N | e7dkfU11 | A: extended segments | X: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology) | H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology) | T: Ubiquinol-cytochrome c reductase 8 kDa protein | F: Ubiq-Cytc-red_N | ECOD (1.6) |
W [auth 22] | Proton_antipo_M | e7dkf221 | A: alpha complex topology | X: Sodium/proton antiporter subunits-like (From Homology) | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit L (NuoL)-related | F: Proton_antipo_M | ECOD (1.6) |
Z [auth 52] | Oxidored_q2 | e7dkf521 | A: alpha complex topology | X: NADH-quinone oxidoreductase subunit K (From Topology) | H: NADH-quinone oxidoreductase subunit K (From Topology) | T: NADH-quinone oxidoreductase subunit K | F: Oxidored_q2 | ECOD (1.6) |
BA [auth 82] | NADH_4Fe-4S | e7dkf821 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: NADH_4Fe-4S | ECOD (1.6) |
BA [auth 82] | SLBB | e7dkf823 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Nqo1 middle domain-like | F: SLBB | ECOD (1.6) |
BA [auth 82] | Complex1_51K | e7dkf822 | A: a/b three-layered sandwiches | X: Nqo1 FMN-binding domain-like (From Topology) | H: Nqo1 FMN-binding domain-like (From Topology) | T: Nqo1 FMN-binding domain-like | F: Complex1_51K | ECOD (1.6) |
DA [auth A2] | PRK09129 | e7dkfA23 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: PRK09129 | ECOD (1.6) |
DA [auth A2] | Fer2_4 | e7dkfA26 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_4 | ECOD (1.6) |
DA [auth A2] | Molybdop_Fe4S4_1 | e7dkfA22 | A: a+b two layers | X: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domain 1 | F: Molybdop_Fe4S4_1 | ECOD (1.6) |
DA [auth A2] | Molybdopterin_2nd | e7dkfA21 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: Molybdopterin_2nd | ECOD (1.6) |
DA [auth A2] | Molybdopterin_1st | e7dkfA25 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology) | T: Formate dehydrogenase/DMSO reductase, domains 2 and 3 | F: Molybdopterin_1st | ECOD (1.6) |
DA [auth A2] | NADH-G_4Fe-4S_3 | e7dkfA24 | A: extended segments | X: iron-sulfur center-binding helical hairpin (From Topology) | H: iron-sulfur center-binding helical hairpin (From Topology) | T: iron-sulfur center-binding helical hairpin | F: NADH-G_4Fe-4S_3 | ECOD (1.6) |
EA [auth B2] | Complex1_49kDa_1st | e7dkfB21 | A: alpha complex topology | X: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology) | H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology) | T: alpha-helical domain in nickel-iron hydrogenase, large subunit | F: Complex1_49kDa_1st | ECOD (1.6) |
EA [auth B2] | NuoD | e7dkfB23 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology) | T: Ni-Fe binding domain in nickel-iron hydrogenase large subunit | F: NuoD | ECOD (1.6) |
EA [auth B2] | Complex1_49kDa_2nd | e7dkfB22 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology) | T: Ni-Fe binding domain in nickel-iron hydrogenase large subunit | F: Complex1_49kDa_2nd | ECOD (1.6) |
FA [auth C2] | Complex1_30kDa | e7dkfC21 | A: a+b two layers | X: Nqo5-like | H: Nqo5-like (From Topology) | T: Nqo5-like | F: Complex1_30kDa | ECOD (1.6) |
KA [auth H2] | Ndufs5 | e7dkfH21 | A: alpha bundles | X: cytochrome bc1 complex 11 kDa protein-like | H: CHCH domain (From Topology) | T: CHCH domain | F: Ndufs5 | ECOD (1.6) |
OA [auth L2] | NADHdh_A3 | e7dkfL21 | A: extended segments | X: Mitochondrial complex I, B9 subunit (From Topology) | H: Mitochondrial complex I, B9 subunit (From Topology) | T: Mitochondrial complex I, B9 subunit | F: NADHdh_A3 | ECOD (1.6) |
SA [auth Q2] | CHCH | e7dkfQ21 | A: few secondary structure elements | X: p8-MTCP1-related (From Topology) | H: p8-MTCP1-related (From Topology) | T: p8-MTCP1-related | F: CHCH | ECOD (1.6) |
TA [auth R2] | NAD_binding_10 | e7dkfR21 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: NAD_binding_10 | ECOD (1.6) |
GB [auth f2] | Complex1_LYR | e7dkff21 | A: alpha bundles | X: LYR protein (From Topology) | H: LYR protein (From Topology) | T: LYR protein | F: Complex1_LYR | ECOD (1.6) |
UB [auth F3] | COX5B | e7dkfF31 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Cytochrome c oxidase Subunit F | F: COX5B | ECOD (1.6) |
VB [auth G3] | COX6A | e7dkfG31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIa (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIa | F: COX6A | ECOD (1.6) |
XB [auth I3] | COX6C | e7dkfI31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIc (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIc (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIc | F: COX6C | ECOD (1.6) |
A [auth A1] | Peptidase_M16_C | e7dkfA12 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C | ECOD (1.6) |
A [auth A1] | Peptidase_M16 | e7dkfA11 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
L [auth M1] | Peptidase_M16_C | e7dkfM12 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C | ECOD (1.6) |
L [auth M1] | Peptidase_M16 | e7dkfM11 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
J [auth J1] | UCR_UQCRX_QCR9 | e7dkfJ11 | A: extended segments | X: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_UQCRX_QCR9 | ECOD (1.6) |
U [auth V1] | UCR_UQCRX_QCR9 | e7dkfV11 | A: extended segments | X: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_UQCRX_QCR9 | ECOD (1.6) |
K [auth K1] | UCR_6-4kD | e7dkfK11 | A: extended segments | X: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_6-4kD | ECOD (1.6) |
V [auth W1] | UCR_6-4kD | e7dkfW11 | A: extended segments | X: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_6-4kD | ECOD (1.6) |
X [auth 32] | Oxidored_q4 | e7dkf321 | A: extended segments | X: NADH-quinone oxidoreductase subunit A (From Topology) | H: NADH-quinone oxidoreductase subunit A (From Topology) | T: NADH-quinone oxidoreductase subunit A | F: Oxidored_q4 | ECOD (1.6) |
Y [auth 42] | Proton_antipo_M | e7dkf421 | A: alpha complex topology | X: Sodium/proton antiporter subunits-like (From Homology) | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit L (NuoL)-related | F: Proton_antipo_M | ECOD (1.6) |
AA [auth 72] | Oxidored_q3_1 | e7dkf721 | A: extended segments | X: NADH-quinone oxidoreductase subunit J (From Topology) | H: NADH-quinone oxidoreductase subunit J (From Topology) | T: NADH-quinone oxidoreductase subunit J | F: Oxidored_q3_1 | ECOD (1.6) |
CA [auth 92] | 2Fe-2S_thioredx_N | e7dkf921 | A: alpha bundles | X: NQO2 helical bundle domain (From Topology) | H: NQO2 helical bundle domain (From Topology) | T: NQO2 helical bundle domain | F: 2Fe-2S_thioredx_N | ECOD (1.6) |
CA [auth 92] | 2Fe-2S_thioredx_C | e7dkf922 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C | ECOD (1.6) |
B [auth B1] | Peptidase_M16_C | e7dkfB12 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C | ECOD (1.6) |
B [auth B1] | Peptidase_M16 | e7dkfB11 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
M [auth N1] | Peptidase_M16_C | e7dkfN12 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16_C | ECOD (1.6) |
M [auth N1] | Peptidase_M16 | e7dkfN11 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: LuxS/MPP-like metallohydrolase | F: Peptidase_M16 | ECOD (1.6) |
GA [auth D2] | Oxidored_q6 | e7dkfD21 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: CheY-like | F: Oxidored_q6 | ECOD (1.6) |
HA [auth E2] | Fer4_21_1 | e7dkfE21 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: Fer4_21_1 | ECOD (1.6) |
JA [auth G2] | ETC_C1_NDUFA4 | e7dkfG21 | A: a+b two layers | X: Putative oxidoreductase (From Topology) | H: Putative oxidoreductase (From Topology) | T: Putative oxidoreductase | F: ETC_C1_NDUFA4 | ECOD (1.6) |
LA [auth I2] | zf-CHCC | e7dkfI21 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Cytochrome c oxidase Subunit F | F: zf-CHCC | ECOD (1.6) |
MA [auth J2] | MWFE | e7dkfJ21 | A: extended segments | X: Mitochondrial complex I, MWFE subunit (From Topology) | H: Mitochondrial complex I, MWFE subunit (From Topology) | T: Mitochondrial complex I, MWFE subunit | F: MWFE | ECOD (1.6) |
NA [auth K2] | L51_S25_CI-B8 | e7dkfK21 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: L51_S25_CI-B8 | ECOD (1.6) |
PA [auth N2] | ETC_C1_NDUFA5 | e7dkfN21 | A: extended segments | X: FATC domain (From Topology) | H: FATC domain (From Topology) | T: FATC domain | F: ETC_C1_NDUFA5 | ECOD (1.6) |
QA [auth O2] | Complex1_LYR | e7dkfO21 | A: alpha bundles | X: LYR protein (From Topology) | H: LYR protein (From Topology) | T: LYR protein | F: Complex1_LYR | ECOD (1.6) |
UA [auth S2] | dNK_2 | e7dkfS21 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: dNK_2 | ECOD (1.6) |
WA [auth U2] | NDUFA12 | e7dkfU21 | A: a+b three layers | X: Mitochondrial complex I, B17.2 subunit (From Topology) | H: Mitochondrial complex I, B17.2 subunit (From Topology) | T: Mitochondrial complex I, B17.2 subunit | F: NDUFA12 | ECOD (1.6) |
XA [auth V2] | GRIM-19 | e7dkfV21 | A: extended segments | X: Mitochondrial complex I, B16.6 subunit (From Topology) | H: Mitochondrial complex I, B16.6 subunit (From Topology) | T: Mitochondrial complex I, B16.6 subunit | F: GRIM-19 | ECOD (1.6) |
OB [auth M2] | PP-binding | e7dkfM21 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
YA [auth W2] | PP-binding | e7dkfW21 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
ZA [auth X2] | NADH_oxidored | e7dkfX21 | A: extended segments | X: Mitochondrial complex I, MNLL subunit (From Topology) | H: Mitochondrial complex I, MNLL subunit (From Topology) | T: Mitochondrial complex I, MNLL subunit | F: NADH_oxidored | ECOD (1.6) |
AB [auth Y2] | NADH_B2 | e7dkfY21 | A: extended segments | X: Mitochondrial complex I, AGGG subunit (From Topology) | H: Mitochondrial complex I, AGGG subunit (From Topology) | T: Mitochondrial complex I, AGGG subunit | F: NADH_B2 | ECOD (1.6) |
DB [auth b2] | NDUF_B5 | e7dkfb21 | A: extended segments | X: Mitochondrial complex I, SGDH subunit (From Topology) | H: Mitochondrial complex I, SGDH subunit (From Topology) | T: Mitochondrial complex I, SGDH subunit | F: NDUF_B5 | ECOD (1.6) |
IB [auth i2] | NADH_dh_m_C1 | e7dkfi21 | A: extended segments | X: Mitochondrial complex I, KFYI subunit (From Topology) | H: Mitochondrial complex I, KFYI subunit (From Topology) | T: Mitochondrial complex I, KFYI subunit | F: NADH_dh_m_C1 | ECOD (1.6) |
JB [auth j2] | NDUF_C2 | e7dkfj21 | A: extended segments | X: Mitochondrial complex I, B14.5b subunit (From Topology) | H: Mitochondrial complex I, B14.5b subunit (From Topology) | T: Mitochondrial complex I, B14.5b subunit | F: NDUF_C2 | ECOD (1.6) |
KB [auth 12] | NADHdh | e7dkf121 | A: alpha complex topology | X: Sodium/proton antiporter subunits-like (From Homology) | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: NADHdh | ECOD (1.6) |
LB [auth 62] | Proton_antipo_M | e7dkf621 | A: alpha complex topology | X: Sodium/proton antiporter subunits-like (From Homology) | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit L (NuoL)-related | F: Proton_antipo_M | ECOD (1.6) |
MB [auth g2] | NDUFB10 | e7dkfg21 | A: alpha bundles | X: Mitochondrial complex I, PDSW subunit (From Topology) | H: Mitochondrial complex I, PDSW subunit (From Topology) | T: Mitochondrial complex I, PDSW subunit | F: NDUFB10 | ECOD (1.6) |
PB [auth A3] | COX1 | e7dkfA31 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: COX1 | ECOD (1.6) |
QB [auth B3] | COX2 | e7dkfB32 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: COX2 | ECOD (1.6) |
QB [auth B3] | COX2_TM | e7dkfB31 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: COX2_TM | ECOD (1.6) |
RB [auth C3] | COX3 | e7dkfC31 | A: alpha bundles | X: Cytochrome c oxidase subunit III-like (From Topology) | H: Cytochrome c oxidase subunit III-like (From Topology) | T: Cytochrome c oxidase subunit III-like | F: COX3 | ECOD (1.6) |
SB [auth D3] | COX4 | e7dkfD31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit IV (From Topology) | H: Mitochondrial cytochrome c oxidase subunit IV (From Topology) | T: Mitochondrial cytochrome c oxidase subunit IV | F: COX4 | ECOD (1.6) |
F [auth F1] | UCR_14kD | e7dkfF11 | A: alpha arrays | X: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_14kD | ECOD (1.6) |
Q [auth R1] | UCR_14kD | e7dkfR11 | A: alpha arrays | X: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_14kD | ECOD (1.6) |
TB [auth E3] | COX5A | e7dkfE31 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Cytochrome c oxidase subunit E (From Topology) | T: Cytochrome c oxidase subunit E | F: COX5A | ECOD (1.6) |
WB [auth H3] | COX6B | e7dkfH31 | A: few secondary structure elements | X: Cytochrome c oxidase subunit h (From Topology) | H: Cytochrome c oxidase subunit h (From Topology) | T: Cytochrome c oxidase subunit h | F: COX6B | ECOD (1.6) |
YB [auth J3] | COX7a | e7dkfJ31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIa (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIa | F: COX7a | ECOD (1.6) |
ZB [auth K3] | COX7B | e7dkfK31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIb | F: COX7B | ECOD (1.6) |
AC [auth L3] | COX7C | e7dkfL31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) | F: COX7C | ECOD (1.6) |
BC [auth M3] | COX8 | e7dkfM31 | A: extended segments | X: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology) | H: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology) | T: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) | F: COX8 | ECOD (1.6) |
G [auth G1] | UcrQ | e7dkfG11 | A: extended segments | X: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UcrQ | ECOD (1.6) |
R [auth S1] | UcrQ | e7dkfS11 | A: extended segments | X: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UcrQ | ECOD (1.6) |
H [auth H1] | UCR_hinge | e7dkfH11 | A: alpha bundles | X: cytochrome bc1 complex 11 kDa protein-like | H: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_hinge | ECOD (1.6) |
S [auth T1] | UCR_hinge | e7dkfT11 | A: alpha bundles | X: cytochrome bc1 complex 11 kDa protein-like | H: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: UCR_hinge | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth C1], N [auth O1] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | - | Domain |
C [auth C1], N [auth O1] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | - | Domain |
D [auth D1], O [auth P1] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
E [auth E1], P [auth Q1] | PF02921 | Ubiquinol cytochrome reductase transmembrane region (UCR_TM) | Ubiquinol cytochrome reductase transmembrane region | - | Family |
E [auth E1], P [auth Q1] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
I [auth I1], T [auth U1] | PF09165 | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N) | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal | Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1]. | Domain |
W [auth 22] | PF00361 | Proton-conducting membrane transporter (Proton_antipo_M) | Proton-conducting membrane transporter | - | Family |
W [auth 22] | PF06444 | NADH dehydrogenase subunit 2 C-terminus (NADH_dehy_S2_C) | NADH dehydrogenase subunit 2 C-terminus | - | Family |
Z [auth 52] | PF00420 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2) | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | - | Family |
BA [auth 82] | PF10531 | SLBB domain (SLBB) | SLBB domain | - | Domain |
BA [auth 82] | PF01512 | Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K) | Respiratory-chain NADH dehydrogenase 51 Kd subunit | - | Family |
BA [auth 82] | PF10589 | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S) | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region | - | Domain |
DA [auth A2] | PF00384 | Molybdopterin oxidoreductase (Molybdopterin) | Molybdopterin oxidoreductase | - | Family |
DA [auth A2] | PF00111 | 2Fe-2S iron-sulfur cluster binding domain (Fer2) | 2Fe-2S iron-sulfur cluster binding domain | - | Domain |
DA [auth A2] | PF09326 | NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C) | NADH-ubiquinone oxidoreductase subunit G, C-terminal | - | Family |
DA [auth A2] | PF10588 | NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3) | NADH-ubiquinone oxidoreductase-G iron-sulfur binding region | - | Domain |
EA [auth B2] | PF00346 | Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa) | Respiratory-chain NADH dehydrogenase, 49 Kd subunit | - | Family |
FA [auth C2] | PF00329 | Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa) | Respiratory-chain NADH dehydrogenase, 30 Kd subunit | - | Family |
KA [auth H2] | PF10200 | NADH:ubiquinone oxidoreductase, NDUFS5-15kDa (Ndufs5) | NADH:ubiquinone oxidoreductase, NDUFS5-15kDa | - | Family |
OA [auth L2] | PF14987 | NADH dehydrogenase 1 alpha subcomplex subunit 3 (NADHdh_A3) | NADH dehydrogenase 1 alpha subcomplex subunit 3 | - | Family |
SA [auth Q2] | PF06747 | CHCH domain (CHCH) | CHCH domain | we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ... | Domain |
TA [auth R2] | PF01370 | NAD dependent epimerase/dehydratase family (Epimerase) | NAD dependent epimerase/dehydratase family | - | Family |
CB [auth a2] | PF07225 | NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) (NDUF_B4) | NADH-ubiquinone oxidoreductase B15 subunit (NDUFB4) | - | Family |
EB [auth c2] | PF09782 | NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit (NDUF_B6) | NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit | - | Family |
GB [auth f2] | PF05347 | Complex 1 protein (LYR family) (Complex1_LYR) | Complex 1 protein (LYR family) | - | Family |
NB [auth e2] | PF05821 | NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) (NDUF_B8) | NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) | - | Family |
UB [auth F3] | PF01215 | Cytochrome c oxidase subunit Vb (COX5B) | Cytochrome c oxidase subunit Vb | - | Domain |
VB [auth G3] | PF02046 | Cytochrome c oxidase subunit VIa (COX6A) | Cytochrome c oxidase subunit VIa | - | Family |
XB [auth I3] | PF02937 | Cytochrome c oxidase subunit VIc (COX6C) | Cytochrome c oxidase subunit VIc | - | Family |
A [auth A1], L [auth M1] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
A [auth A1], L [auth M1] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
J [auth J1], U [auth V1] | PF05365 | Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9) | Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like | - | Family |
K [auth K1], V [auth W1] | PF08997 | Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD) | Ubiquinol-cytochrome C reductase complex, 6.4kD protein | The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ... | Domain |
X [auth 32] | PF00507 | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4) | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 | - | Family |
Y [auth 42] | PF00361 | Proton-conducting membrane transporter (Proton_antipo_M) | Proton-conducting membrane transporter | - | Family |
Y [auth 42] | PF01059 | NADH-ubiquinone oxidoreductase chain 4, amino terminus (Oxidored_q5_N) | NADH-ubiquinone oxidoreductase chain 4, amino terminus | - | Family |
AA [auth 72] | PF00499 | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3) | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 | - | Family |
CA [auth 92] | PF01257 | Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx) | Thioredoxin-like [2Fe-2S] ferredoxin | - | Family |
B [auth B1], M [auth N1] | PF05193 | Peptidase M16 inactive domain (Peptidase_M16_C) | Peptidase M16 inactive domain | Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1]. | Domain |
B [auth B1], M [auth N1] | PF00675 | Insulinase (Peptidase family M16) (Peptidase_M16) | Insulinase (Peptidase family M16) | - | Family |
GA [auth D2] | PF01058 | NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6) | NADH ubiquinone oxidoreductase, 20 Kd subunit | - | Family |
HA [auth E2] | PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain |
IA [auth F2] | PF15880 | NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial (NDUFV3) | NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial | - | Family |
JA [auth G2] | PF04800 | NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4) | NADH dehydrogenase ubiquinone Fe-S protein 4 | - | Family |
LA [auth I2] | PF10276 | Zinc-finger domain (zf-CHCC) | Zinc-finger domain | This is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C. | Domain |
MA [auth J2] | PF15879 | NADH-ubiquinone oxidoreductase MWFE subunit (MWFE) | NADH-ubiquinone oxidoreductase MWFE subunit | - | Family |
NA [auth K2] | PF05047 | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8) | Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain | The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ... | Domain |
PA [auth N2] | PF04716 | ETC complex I subunit conserved region (ETC_C1_NDUFA5) | ETC complex I subunit conserved region | - | Family |
QA [auth O2] | PF13233 | Complex1_LYR-like (Complex1_LYR_2) | Complex1_LYR-like | - | Family |
RA [auth P2] | PF07347 | NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) (CI-B14_5a) | NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) | - | Family |
UA [auth S2] | PF01712 | Deoxynucleoside kinase (dNK) | Deoxynucleoside kinase | This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ... | Domain |
VA [auth T2] | PF02466 | Tim17/Tim22/Tim23/Pmp24 family (Tim17) | Tim17/Tim22/Tim23/Pmp24 family | - | Family |
WA [auth U2] | PF05071 | NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12) | NADH ubiquinone oxidoreductase subunit NDUFA12 | - | Family |
XA [auth V2] | PF06212 | GRIM-19 protein (GRIM-19) | GRIM-19 protein | - | Family |
OB [auth M2], YA [auth W2] | PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain |
ZA [auth X2] | PF08040 | MNLL subunit (NADH_oxidored) | MNLL subunit | - | Family |
AB [auth Y2] | PF14813 | NADH dehydrogenase 1 beta subcomplex subunit 2 (NADH_B2) | NADH dehydrogenase 1 beta subcomplex subunit 2 | - | Family |
BB [auth Z2] | PF08122 | NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12) | NADH-ubiquinone oxidoreductase B12 subunit family | - | Family |
DB [auth b2] | PF09781 | NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit (NDUF_B5) | NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit | - | Family |
FB [auth d2] | PF05676 | NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7) | NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) | - | Family |
HB [auth h2] | PF10183 | ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) (ESSS) | ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) | - | Family |
IB [auth i2] | PF15088 | NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial (NADH_dh_m_C1) | NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial | - | Family |
JB [auth j2] | PF06374 | NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) (NDUF_C2) | NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) | - | Family |
KB [auth 12] | PF00146 | NADH dehydrogenase (NADHdh) | NADH dehydrogenase | - | Family |
LB [auth 62] | PF00361 | Proton-conducting membrane transporter (Proton_antipo_M) | Proton-conducting membrane transporter | - | Family |
LB [auth 62] | PF06455 | NADH dehydrogenase subunit 5 C-terminus (NADH5_C) | NADH dehydrogenase subunit 5 C-terminus | - | Family |
LB [auth 62] | PF00662 | NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N) | NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus | - | Family |
MB [auth g2] | PF10249 | NADH-ubiquinone oxidoreductase subunit 10 (NDUFB10) | NADH-ubiquinone oxidoreductase subunit 10 | - | Family |
PB [auth A3] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
QB [auth B3] | PF00116 | Cytochrome C oxidase subunit II, periplasmic domain (COX2) | Cytochrome C oxidase subunit II, periplasmic domain | - | Domain |
QB [auth B3] | PF02790 | Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM) | Cytochrome C oxidase subunit II, transmembrane domain | - | Family |
RB [auth C3] | PF00510 | Cytochrome c oxidase subunit III (COX3) | Cytochrome c oxidase subunit III | - | Family |
SB [auth D3] | PF02936 | Cytochrome c oxidase subunit IV (COX4) | Cytochrome c oxidase subunit IV | - | Family |
F [auth F1], Q [auth R1] | PF02271 | Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD) | Ubiquinol-cytochrome C reductase complex 14kD subunit | - | Family |
TB [auth E3] | PF02284 | Cytochrome c oxidase subunit Va (COX5A) | Cytochrome c oxidase subunit Va | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of cytochrome c oxidase subunit Va. | Domain |
WB [auth H3] | PF02297 | Cytochrome oxidase c subunit VIb (COX6B) | Cytochrome oxidase c subunit VIb | Cytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase. | Domain |
YB [auth J3] | PF02238 | Cytochrome c oxidase subunit VII (COX7a) | Cytochrome c oxidase subunit VII | - | Family |
ZB [auth K3] | PF05392 | Cytochrome C oxidase chain VIIB (COX7B) | Cytochrome C oxidase chain VIIB | - | Family |
AC [auth L3] | PF02935 | Cytochrome c oxidase subunit VIIc (COX7C) | Cytochrome c oxidase subunit VIIc | - | Family |
BC [auth M3] | PF02285 | Cytochrome oxidase c subunit VIII (COX8) | Cytochrome oxidase c subunit VIII | - | Family |
G [auth G1], R [auth S1] | PF02939 | UcrQ family (UcrQ) | UcrQ family | - | Family |
H [auth H1], S [auth T1] | PF02320 | Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge) | Ubiquinol-cytochrome C reductase hinge protein | - | Family |