7D72 | pdb_00007d72

Cryo-EM structures of human GMPPA/GMPPB complex bound to GDP-Mannose


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth D]Hexapep_2_1e7d72D2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
F [auth D]NTP_transferasee7d72D1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
E [auth C]Hexapep_2_1e7d72C2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
E [auth C]NTP_transferasee7d72C1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
D [auth B]Hexapep_2_1e7d72B2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
D [auth B]NTP_transferasee7d72B1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
C [auth A]Hexapep_2_1e7d72A2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
C [auth A]NTP_transferasee7d72A1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
LHexapep_2_1e7d72L2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
LNTP_transferasee7d72L1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
K [auth J]Hexapep_2_1e7d72J2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
K [auth J]NTP_transferasee7d72J1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
J [auth H]Hexapep_2_1e7d72H1 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
J [auth H]NTP_transferasee7d72H2 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
I [auth G]Hexapep_2_1e7d72G2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
I [auth G]NTP_transferasee7d72G1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
H [auth F]Hexapep_2_1e7d72F2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
H [auth F]NTP_transferasee7d72F1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
G [auth E]Hexapep_2_1e7d72E1 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
G [auth E]NTP_transferasee7d72E2 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
B [auth I]Hexapep_2_1e7d72I2 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
B [auth I]NTP_transferasee7d72I1 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)
A [auth K]Hexapep_2_1e7d72K1 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: Hexapep_2_1ECOD (1.6)
A [auth K]NTP_transferasee7d72K2 A: a/b three-layered sandwichesX: Nucleotide-diphospho-sugar transferases (From Topology)H: Nucleotide-diphospho-sugar transferases (From Topology)T: Nucleotide-diphospho-sugar transferasesF: NTP_transferaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F [auth D]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
F [auth D]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
E [auth C]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
E [auth C]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
D [auth B]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
D [auth B]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
C [auth A]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
C [auth A]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
L3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
L2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
K [auth J]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
K [auth J]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
J [auth H]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
J [auth H]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
I [auth G]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
I [auth G]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
H [auth F]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
H [auth F]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
G [auth E]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
G [auth E]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
B [auth I]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
B [auth I]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)
A [auth K]3.90.550.10 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (utative)
A [auth K]2.160.10.10 Mainly Beta 3 Solenoid UDP N-Acetylglucosamine Acyltransferase domain 1CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A],
D [auth B],
E [auth C],
F [auth D]
Mannose-1-phosphate guanyltransferase alpha
Mannose-1-phosphate guanyltransferase beta

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A],
D [auth B],
E [auth C],
F [auth D]
IPR005835Nucleotidyl transferase domainDomain
C [auth A],
D [auth B],
E [auth C],
F [auth D]
IPR050486Mannose-1-phosphate guanyltransferaseFamily
C [auth A],
D [auth B],
E [auth C],
F [auth D]
IPR056729Mannose-1-phosphate guanyltransferase, C-terminal domainDomain
C [auth A],
D [auth B],
E [auth C],
F [auth D]
IPR029044Nucleotide-diphospho-sugar transferasesHomologous Superfamily
C [auth A],
D [auth B],
E [auth C],
F [auth D]
IPR018357Hexapeptide transferase, conserved siteConserved Site
IPR045233Mannose-1-phosphate guanyltransferase, N-terminal domainDomain
IPR050486Mannose-1-phosphate guanyltransferaseFamily
IPR056729Mannose-1-phosphate guanyltransferase, C-terminal domainDomain
IPR005835Nucleotidyl transferase domainDomain
IPR029044Nucleotide-diphospho-sugar transferasesHomologous Superfamily
IPR018357Hexapeptide transferase, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth A],
D [auth B],
E [auth C],
F [auth D]
PharosQ96IJ6
PharosQ9Y5P6