7CVO
crystal structure of Arabidopsis CO CCT domain in complex with NF-YB3/YC4 and FT CORE2 DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | TBP-associated factors TAFs | 8103505 | 4000797 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Core histone-like | 8103506 | 3001387 | SCOP2 (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Core histone-like | 8103506 | 3001387 | SCOP2B (2022-06-29) |
B | SCOP2 Family | TBP-associated factors TAFs | 8103341 | 4000797 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Core histone-like | 8103342 | 3001387 | SCOP2 (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Core histone-like | 8103342 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth F] | PF00808 | e7cvoF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00808 | ECOD (1.6) |
B | PF00808 | e7cvoB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00808 | ECOD (1.6) |
F [auth G] | PF00808 | e7cvoG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00808 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, E [auth F] | PF06203 | CCT motif (CCT) | CCT motif | - | Motif |
A, E [auth F] | PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain |
B, F [auth G] | PF00808 | Histone-like transcription factor (CBF/NF-Y) and archaeal histone (CBFD_NFYB_HMF) | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | This family includes archaebacterial histones and histone like transcription factors from eukaryotes. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, E [auth F] | IPR009072 | Histone-fold | Homologous Superfamily |
A, E [auth F] | IPR007125 | Histone H2A/H2B/H3 | Domain |
A, E [auth F] | IPR000315 | B-box-type zinc finger | Domain |
A, E [auth F] | IPR010402 | CCT domain | Domain |
A, E [auth F] | IPR049808 | CONSTANS-like, B-box-type 1 zinc finger | Domain |
A, E [auth F] | IPR045281 | Zinc finger protein CONSTANS-like | Family |
B, F [auth G] | IPR009072 | Histone-fold | Homologous Superfamily |
B, F [auth G] | IPR027113 | Transcription factor NFYB/HAP3 | Family |
B, F [auth G] | IPR003956 | Transcription factor, NFYB/HAP3, conserved site | Conserved Site |
B, F [auth G] | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain | Domain |