7CTX | pdb_00007ctx

Crystal structure of Arabidopsis thaliana SOBIR1 kinase domain(residues 388-401 deleted) in complex with AMP-PNP and magnesium

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	UCR_UQCRX_QCR9	e7ctxB1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: UCR_UQCRX_QCR9	ECOD (v294.1)
A	UCR_UQCRX_QCR9	e7ctxA1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: UCR_UQCRX_QCR9	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding protein serine/threonine kinase activity catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups molecular transducer activity signaling receptor activity protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity protein serine kinase activity	multicellular organismal process regulation of developmental process regulation of reproductive process reproductive process negative regulation of biological process developmental process involved in reproduction multicellular organism development reproductive shoot system development anatomical structure development reproductive structure development post-embryonic development system development developmental process regulation of biological process multicellular organismal process regulation of developmental process regulation of reproductive process reproductive process negative regulation of biological process developmental process involved in reproduction multicellular organism development reproductive shoot system development anatomical structure development reproductive structure development post-embryonic development system development developmental process regulation of biological process plant organ development reproductive system development abscission negative regulation of developmental process negative regulation of floral organ abscission biological regulation flower development negative regulation of reproductive process shoot system development floral organ abscission regulation of floral organ abscission floral organ development positive regulation of programmed cell death regulation of cellular process positive regulation of biological process cellular process regulation of programmed cell death cell death programmed cell death positive regulation of cellular process regulation of defense response response to stimulus defense response positive regulation of response to stimulus regulation of response to stimulus regulation of response to stress response to stress positive regulation of defense response	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle peroxisome microbody cytoplasm intracellular membrane-bounded organelle cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001611	Leucine-rich repeat	Repeat
A, B	IPR050647	Plant LRR receptor-like serine/threonine-protein kinases	Family
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR008271	Serine/threonine-protein kinase, active site	Active Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.