7CNC | pdb_00007cnc

cystal structure of human ERH in complex with DGCR8

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d7cnca_	Alpha and beta proteins (a+b)	ERH-like	ERH-like	ERH-like	Enhancer of rudimentary homolog, ERH	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ERH-like	8043142	3000225	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	V-set	e7cncA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01133	Enhancer of rudimentary (ER)	Enhancer of rudimentary	Enhancer of rudimentary is a protein of unknown function that is highly conserved in plants and animals. This protein is found to be an enhancer of the rudimentary gene Swiss:P05990.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Microprocessor complex subunit DGCR8	RNA binding double-stranded RNA binding binding nucleic acid binding primary miRNA binding protein-macromolecule adaptor activity molecular adaptor activity protein-RNA adaptor activity identical protein binding protein binding protein homodimerization activity protein dimerization activity tetrapyrrole binding heme binding RNA binding double-stranded RNA binding binding nucleic acid binding primary miRNA binding protein-macromolecule adaptor activity molecular adaptor activity protein-RNA adaptor activity identical protein binding protein binding protein homodimerization activity protein dimerization activity tetrapyrrole binding heme binding cation binding ion binding metal ion binding small molecule binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of stem cell proliferation regulation of biological process stem cell proliferation cell population proliferation regulation of cellular process regulation of cell population proliferation biological regulation pre-miRNA processing cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of stem cell proliferation regulation of biological process stem cell proliferation cell population proliferation regulation of cellular process regulation of cell population proliferation biological regulation pre-miRNA processing negative regulation of biological process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process positive regulation of post-transcriptional gene silencing nucleobase-containing compound metabolic process positive regulation of metabolic process post-transcriptional regulation of gene expression positive regulation of post-transcriptional gene silencing by RNA positive regulation of macromolecule metabolic process RNA processing negative regulation of metabolic process primary metabolic process regulation of miRNA processing regulation of gene expression miRNA-mediated post-transcriptional gene silencing negative regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process post-transcriptional gene silencing miRNA processing regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of pre-miRNA processing positive regulation of biological process RNA metabolic process regulation of miRNA-mediated gene silencing RNA biosynthetic process nucleic acid biosynthetic process regulation of regulatory ncRNA processing positive regulation of miRNA-mediated gene silencing regulation of gene silencing by regulatory ncRNA positive regulation of biosynthetic process negative regulation of cellular process regulation of post-transcriptional gene silencing by regulatory ncRNA positive regulation of miRNA processing positive regulation of cellular process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process regulatory ncRNA-mediated post-transcriptional gene silencing regulatory ncRNA processing regulatory ncRNA-mediated gene silencing regulation of post-transcriptional gene silencing negative regulation of biosynthetic process positive regulation of gene expression positive regulation of pre-miRNA processing primary miRNA processing	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cytoplasm cytosol nucleoplasm synapse cell junction glutamatergic synapse postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization asymmetric synapse microprocessor complex protein-containing complex catalytic complex nuclear protein-containing complex endonuclease complex endoribonuclease complex ribonuclease III complex intracellular protein-containing complex site of double-strand break site of DNA damage chromosome nuclear body
A	Enhancer of rudimentary homolog	sequence-specific DNA binding DNA binding binding nucleoside phosphate binding nucleotide binding nucleic acid binding heterocyclic compound binding methyl-CpG binding small molecule binding RNA binding	nucleobase-containing compound metabolic process primary metabolic process metabolic process cellular process pyrimidine-containing compound metabolic process nucleobase-containing small molecule metabolic process carbohydrate derivative metabolic process small molecule metabolic process pyrimidine nucleoside metabolic process nucleoside metabolic process	midbody cellular anatomical structure protein-containing complex intracellular anatomical structure catalytic complex methylosome methyltransferase complex cytoplasm transferase complex membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR036020	WW domain superfamily	Homologous Superfamily
B	IPR040375	Microprocessor complex subunit DGCR8	Family
B	IPR001202	WW domain	Domain
B	IPR014720	Double-stranded RNA-binding domain	Domain
A	IPR035912	Enhancer of rudimentary superfamily	Homologous Superfamily
A	IPR000781	Enhancer of rudimentary	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: Q8WYQ5	DiGeorge syndrome kidney Wilms tumor schizophrenia Behavior Disorders cystic fibrosis osteosarcoma pancreatic intraductal papillary-mucinous neoplasm psychiatric disorder depressive disorder ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia velocardiofacial syndrome pancreatic intraductal papillary-mucinous carcinoma psoriasis
A	Pharos: P84090	diabetes mellitus osteosarcoma lymphoplasmacytic lymphoma pancreatic ductal adenocarcinoma MALT lymphoma plasma cell myeloma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.