Crystal structure of HTH-type transcriptional regulator SkgA from Caulobacter crescentus
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | V-set | e7claA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF07739 | TipAS antibiotic-recognition domain (TipAS) | TipAS antibiotic-recognition domain | This domain is found at the C-terminus of some MerR family transcription factors. The domain has an alpha-helical globin-like fold [1]. The family includes Mta a central regulator of multidrug resistance in Bacillus subtilis. | Domain | |
| PF00376 | MerR family regulatory protein (MerR) | MerR family regulatory protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| HTH-type transcriptional regulator SkgA | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
| IPR047057 | MerR transcriptional regulator | Family | |
| IPR012925 | TipAS antibiotic-recognition domain | Domain | |
| IPR036244 | TipA-like multidrug resistance regulator, antibiotic-recognition domain | Homologous Superfamily | |
| IPR000551 | MerR-type HTH domain | Domain |
