7C8O | pdb_00007c8o

Crystal structure of IscU D40A/H106A variant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d7c8od_	Alpha and beta proteins (a+b)	SufE/NifU	SufE/NifU	automated matches	automated matches	(Methanothrix thermoacetophila ) [TaxId: 2224 ],	SCOPe (2.08)
C	d7c8oc_	Alpha and beta proteins (a+b)	SufE/NifU	SufE/NifU	automated matches	automated matches	(Methanothrix thermoacetophila ) [TaxId: 2224 ],	SCOPe (2.08)
B	d7c8ob_	Alpha and beta proteins (a+b)	SufE/NifU	SufE/NifU	automated matches	automated matches	(Methanothrix thermoacetophila ) [TaxId: 2224 ],	SCOPe (2.08)
A	d7c8oa_	Alpha and beta proteins (a+b)	SufE/NifU	SufE/NifU	automated matches	automated matches	(Methanothrix thermoacetophila ) [TaxId: 2224 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	SufE/NifU	8103300	3000436	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	SufE/NifU	8103300	3000436	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	SufE/NifU	8103300	3000436	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	SufE/NifU	8103300	3000436	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PsbY	e7c8oD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
C	Acetyltransf_1	e7c8oC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Acetyltransf_1	ECOD (v294.1)
B	PsbY	e7c8oB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
A	PsbY	e7c8oA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01592	NifU-like N terminal domain (NifU_N)	NifU-like N terminal domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Nitrogen-fixing NifU domain protein	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding	cellular component biogenesis cellular component organization metallo-sulfur cluster assembly cellular component assembly iron-sulfur cluster assembly cellular process cellular component organization or biogenesis	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002871	NIF system FeS cluster assembly, NifU, N-terminal	Domain
A, B, C, D	IPR017787	NIF system FeS cluster assembly, NifU-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.