7BVW | pdb_00007bvw

Crystal structure of the RING-H2 domain of Arabidopsis RMR1

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	zf-RING_2	e7bvwB1	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: zf-RING_2	ECOD (1.6)
A	zf-RING_2	e7bvwA1	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: zf-RING_2	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF13639	Ring finger domain (zf-RING_2)	Ring finger domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	AT5G66160 protein	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport	membrane-bounded organelle vacuolar membrane storage vacuole plant-type vacuole membrane intracellular anatomical structure membrane vacuole intracellular membrane-bounded organelle protein storage vacuole membrane protein storage vacuole intracellular organelle cellular anatomical structure bounding membrane of organelle organelle membrane-bounded organelle vacuolar membrane storage vacuole plant-type vacuole membrane intracellular anatomical structure membrane vacuole intracellular membrane-bounded organelle protein storage vacuole membrane protein storage vacuole intracellular organelle cellular anatomical structure bounding membrane of organelle organelle plant-type vacuole cytoplasm organelle membrane Golgi membrane Golgi apparatus endomembrane system endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR044744	ZNRF4 /RNF13/RNF167, PA domain	Domain
A, B	IPR051653	E3 ubiquitin-protein ligase and sorting receptor	Family
A, B	IPR046450	PA domain superfamily	Homologous Superfamily
A, B	IPR003137	PA domain	Domain
A, B	IPR001841	Zinc finger, RING-type	Domain
A, B	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.