Crystal structure of the autophagic STX17/SNAP29/VAMP8 SNARE complex
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| X | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | SNARE fusion complex | 8082567 | 3001549 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | SNARE fusion complex | 8067012 | 3001549 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | SNARE fusion complex | 8079905 | 3001549 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| U | Synaptobrevin | e7bv6U1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
| Q | Synaptobrevin | e7bv6Q1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
| M | Synaptobrevin | e7bv6M1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
| I | Synaptobrevin | e7bv6I1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
| E | Synaptobrevin | e7bv6E1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
| A | Synaptobrevin | e7bv6A1 | A: extended segments | X: Synaptobrevin (From Topology) | H: Synaptobrevin (From Topology) | T: Synaptobrevin | F: Synaptobrevin | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00957 | Synaptobrevin (Synaptobrevin) | Synaptobrevin | The entry represents the entire v-SNARE coiled-coil homology domain. The process of vesicular membrane fusion in eukaryotic cells depends on a conserved fusion machinery called SNARE (soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
| IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
| IPR000727 | Target SNARE coiled-coil homology domain | Domain | |
| IPR006012 | Syntaxin/epimorphin, conserved site | Conserved Site | |
| IPR010989 | SNARE | Homologous Superfamily | |
| IPR028676 | Syntaxin-17, SNARE motif | Domain | |
| IPR045242 | Syntaxin | Family | |
| IPR001388 | Synaptobrevin-like | Family | |
| IPR016444 | Synaptobrevin/Vesicle-associated membrane protein | Family | |
| IPR042855 | v-SNARE, coiled-coil homology domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Bitopic proteins | SNARE complex | SNARE complex |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | SNARE Protein Family | STX17/SNAP29/VAMP8 SNARE complex |














