7BTP | pdb_00007btp

EcoR124I-Ocr in Restriction-Alleviation State


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyB-form DNA mimic Ocr 8041471 3000719 SCOP2B (2022-06-29)
E [auth D]SCOP2B SuperfamilyB-form DNA mimic Ocr 8041471 3000719 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyRecA-like P-loop NTPases 8091625 3002019 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyHsdR C-terminal domain-like 8091622 3002528 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyRestriction endonuclease-like 8091621 3000104 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyRecA-like P-loop NTPases 8091624 3002019 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Focre7btpF1 A: alpha arraysX: HTHH: B-form DNA mimic Ocr (From Topology)T: B-form DNA mimic OcrF: ocrECOD (1.6)
E [auth D]ocre7btpD1 A: alpha arraysX: HTHH: B-form DNA mimic Ocr (From Topology)T: B-form DNA mimic OcrF: ocrECOD (1.6)
D [auth C]HsdM_Ne7btpC2 A: alpha arraysX: N-terminal helical domain in restriction-modification system methylation subunit-likeH: N-terminal helical domain in restriction-modification system methylation subunit (From Topology)T: N-terminal helical domain in restriction-modification system methylation subunitF: HsdM_NECOD (1.6)
D [auth C]N6_Mtasee7btpC1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (1.6)
C [auth B]HsdM_Ne7btpB2 A: alpha arraysX: N-terminal helical domain in restriction-modification system methylation subunit-likeH: N-terminal helical domain in restriction-modification system methylation subunit (From Topology)T: N-terminal helical domain in restriction-modification system methylation subunitF: HsdM_NECOD (1.6)
C [auth B]N6_Mtasee7btpB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (1.6)
B [auth A]EcoR124_C_Ne7btpA2 A: alpha arraysX: HSDR subunit helical domain (From Topology)H: HSDR subunit helical domain (From Topology)T: HSDR subunit helical domainF: EcoR124_C_NECOD (1.6)
B [auth A]EcoR124_C_Ce7btpA5 A: alpha complex topologyX: EcoR124I HsdR C-terminal domain (From Topology)H: EcoR124I HsdR C-terminal domain (From Topology)T: EcoR124I HsdR C-terminal domainF: EcoR124_C_CECOD (1.6)
B [auth A]Helicase_C_8e7btpA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Helicase_C_8ECOD (1.6)
B [auth A]DEAD_1e7btpA3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_1ECOD (1.6)
B [auth A]HSDR_Ne7btpA4 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: HSDR_NECOD (1.6)
A [auth E]Methylase_Se7btpE1 A: a+b complex topologyX: DNA methylase specificity domain (From Topology)H: DNA methylase specificity domain (From Topology)T: DNA methylase specificity domainF: Methylase_SECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth D],
F
Overcome classical restriction gp0.3- -
C [auth B],
D [auth C]
Type I restriction enzyme EcoR124II M protein -
B [auth A]Type I restriction enzyme R Protein -
A [auth E]Type-1 restriction enzyme EcoR124II specificity protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth D],
F
IPR036207B-form DNA mimic OcrHomologous Superfamily
E [auth D],
F
IPR014798Protein OcrFamily
C [auth B],
D [auth C]
IPR004546Restriction endonuclease, type I, methylase subunitFamily
C [auth B],
D [auth C]
IPR002052DNA methylase, N-6 adenine-specific, conserved siteConserved Site
C [auth B],
D [auth C]
IPR003356DNA methylase, adenine-specificDomain
C [auth B],
D [auth C]
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
C [auth B],
D [auth C]
IPR022749N6 adenine-specific DNA methyltransferase, N-terminal domainDomain
C [auth B],
D [auth C]
IPR051537DNA Adenine N(4)/N(6)-MethyltransferaseFamily
C [auth B],
D [auth C]
IPR038333Type I restriction enzyme EcoKI-like, methylase subunit, N-terminal domain superfamilyHomologous Superfamily
B [auth A]IPR007409Restriction endonuclease, type I, HsdR, N-terminalDomain
B [auth A]IPR004473Restriction endonuclease, type I, HsdRFamily
B [auth A]IPR040980SWI2/SNF2 ATPaseDomain
B [auth A]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
B [auth A]IPR022625Type I restriction enzyme R protein, C-terminalDomain
B [auth A]IPR055180Restriction endonuclease, type I, HsdR, second RecA-like helicase domainDomain
B [auth A]IPR051268Type I restriction enzyme R subunitFamily
B [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth E]IPR044946Type I restriction modification DNA specificity domain superfamilyHomologous Superfamily
A [auth E]IPR051212Type I restriction enzyme S subunitFamily
A [auth E]IPR000055Type I restriction modification DNA specificity domainDomain