7BTO | pdb_00007bto

EcoR124I-ArdA in the Translocation State


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth F]SCOP2B SuperfamilyRestriction endonuclease-like 8091621 3000104 SCOP2B (2022-06-29)
E [auth F]SCOP2B SuperfamilyRecA-like P-loop NTPases 8091624 3002019 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyRestriction endonuclease-like 8091621 3000104 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyRecA-like P-loop NTPases 8091624 3002019 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth I]Methylase_Se7btoI1 A: a+b complex topologyX: DNA methylase specificity domain (From Topology)H: DNA methylase specificity domain (From Topology)T: DNA methylase specificity domainF: Methylase_SECOD (1.6)
E [auth F]DEAD_1e7btoF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_1ECOD (1.6)
E [auth F]HSDR_Ne7btoF1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: HSDR_NECOD (1.6)
F [auth G]DEAD_1e7btoG2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DEAD_1ECOD (1.6)
F [auth G]HSDR_Ne7btoG1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: HSDR_NECOD (1.6)
C [auth D]ArdAe7btoD1 A: a+b complex topologyX: ArdA (From Topology)H: ArdA (From Topology)T: ArdAF: ArdAECOD (1.6)
D [auth E]ArdAe7btoE1 A: a+b complex topologyX: ArdA (From Topology)H: ArdA (From Topology)T: ArdAF: ArdAECOD (1.6)
AHsdM_Ne7btoA2 A: alpha arraysX: N-terminal helical domain in restriction-modification system methylation subunit-likeH: N-terminal helical domain in restriction-modification system methylation subunit (From Topology)T: N-terminal helical domain in restriction-modification system methylation subunitF: HsdM_NECOD (1.6)
AN6_Mtasee7btoA1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (1.6)
BHsdM_Ne7btoB2 A: alpha arraysX: N-terminal helical domain in restriction-modification system methylation subunit-likeH: N-terminal helical domain in restriction-modification system methylation subunit (From Topology)T: N-terminal helical domain in restriction-modification system methylation subunitF: HsdM_NECOD (1.6)
BN6_Mtasee7btoB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: N6_MtaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth I]3.90.220.20 Alpha Beta Alpha-Beta Complex Adenine-n6-DNA-methyltransferase TaqI Chain A, domain 2CATH (utative)
E [auth F]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
F [auth G]3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (utative)
C [auth D]3.10.20.480 Alpha Beta Roll Ubiquitin-like (UB roll) Antirestriction protein ArdA, domain 1CATH (utative)
C [auth D]1.10.8.560 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
C [auth D]1.10.10.1190 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Antirestriction protein ArdA, domain 3CATH (utative)
D [auth E]3.10.20.480 Alpha Beta Roll Ubiquitin-like (UB roll) Antirestriction protein ArdA, domain 1CATH (utative)
D [auth E]1.10.8.560 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (utative)
D [auth E]1.10.10.1190 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Antirestriction protein ArdA, domain 3CATH (utative)
A1.20.1260.30 Mainly Alpha Up-down Bundle Ferritin N6 adenine-specific DNA methyltransferase, N-terminal domainCATH (utative)
A3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (utative)
B3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G [auth I]Type-1 restriction enzyme EcoR124II specificity protein -
E [auth F],
F [auth G],
H [auth C],
I [auth H]
Type I restriction enzyme R Protein -
C [auth D],
D [auth E]
Antirestriction protein ArdA---
A, B
Type I restriction enzyme EcoR124II M protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth I]IPR044946Type I restriction modification DNA specificity domain superfamilyHomologous Superfamily
G [auth I]IPR051212Type I restriction enzyme S subunitFamily
G [auth I]IPR000055Type I restriction modification DNA specificity domainDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR007409Restriction endonuclease, type I, HsdR, N-terminalDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR004473Restriction endonuclease, type I, HsdRFamily
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR040980SWI2/SNF2 ATPaseDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR022625Type I restriction enzyme R protein, C-terminalDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR055180Restriction endonuclease, type I, HsdR, second RecA-like helicase domainDomain
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR051268Type I restriction enzyme R subunitFamily
E [auth F],
F [auth G],
H [auth C],
I [auth H]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B
IPR004546Restriction endonuclease, type I, methylase subunitFamily
A, B
IPR002052DNA methylase, N-6 adenine-specific, conserved siteConserved Site
A, B
IPR003356DNA methylase, adenine-specificDomain
A, B
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
A, B
IPR022749N6 adenine-specific DNA methyltransferase, N-terminal domainDomain
A, B
IPR051537DNA Adenine N(4)/N(6)-MethyltransferaseFamily
A, B
IPR038333Type I restriction enzyme EcoKI-like, methylase subunit, N-terminal domain superfamilyHomologous Superfamily