7BFL | pdb_00007bfl

X-ray structure of SS-RNase-2 des116-120

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d7bfld_	Alpha and beta proteins (a+b)	RNase A-like	RNase A-like	automated matches	automated matches	Atlantic salmon (Salmo salar ) [TaxId: 8030 ],	SCOPe (2.08)
C	d7bflc_	Alpha and beta proteins (a+b)	RNase A-like	RNase A-like	automated matches	automated matches	Atlantic salmon (Salmo salar ) [TaxId: 8030 ],	SCOPe (2.08)
B	d7bflb_	Alpha and beta proteins (a+b)	RNase A-like	RNase A-like	automated matches	automated matches	Atlantic salmon (Salmo salar ) [TaxId: 8030 ],	SCOPe (2.08)
A	d7bfla_	Alpha and beta proteins (a+b)	RNase A-like	RNase A-like	automated matches	automated matches	Atlantic salmon (Salmo salar ) [TaxId: 8030 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	RNase A-like	8103090	3001918	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	RNase A-like	8103090	3001918	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	RNase A-like	8103090	3001918	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RNase A-like	8103090	3001918	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Radical_SAM	e7bflD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Radical_SAM	ECOD (v294.1)
C	Radical_SAM	e7bflC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Radical_SAM	ECOD (v294.1)
B	Radical_SAM	e7bflB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Radical_SAM	ECOD (v294.1)
A	Radical_SAM	e7bflA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Radical_SAM	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00074	Pancreatic ribonuclease (RnaseA)	Pancreatic ribonuclease	Ribonucleases. Members include pancreatic RNAase A and angiogenins. Structure is an alpha+beta fold -- long curved beta sheet and three helices.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Angiogenin-1	hydrolase activity catalytic activity binding nucleic acid binding endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid catalytic activity, acting on RNA RNA nuclease activity	biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to external stimulus defense response to Gram-negative bacterium response to biotic stimulus defense response to bacterium response to bacterium response to stress response to external biotic stimulus developmental process multicellular organismal process blood vessel morphogenesis biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to external stimulus defense response to Gram-negative bacterium response to biotic stimulus defense response to bacterium response to bacterium response to stress response to external biotic stimulus developmental process multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development blood vessel development system development defense response to Gram-positive bacterium	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR023412	Ribonuclease A-domain	Domain
A, B, C, D	IPR036816	Ribonuclease A-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR001427	Pancreatic ribonuclease	Family
A, B, C, D	IPR023411	Ribonuclease A, active site	Active Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.