Annotations: 7BFD

Circular permutant of ribosomal protein S6, P54-55 truncated, Y4A mutant.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L [auth I]	CoV_S1_C	e7bfdI1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
K [auth H]	CoV_S1_C	e7bfdH1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
J [auth G]	CoV_S1_C	e7bfdG1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
I [auth F]	CoV_S1_C	e7bfdF1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
H [auth E]	CoV_S1_C	e7bfdE1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
G [auth D]	CoV_S1_C	e7bfdD1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
F [auth C]	CoV_S1_C	e7bfdC1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
E [auth L]	CoV_S1_C	e7bfdL1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
D [auth K]	CoV_S1_C	e7bfdK1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
C [auth J]	CoV_S1_C	e7bfdJ1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
B	CoV_S1_C	e7bfdB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)
A	CoV_S1_C	e7bfdA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: CoV_S1_C	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	30S ribosomal protein S6,30S ribosomal protein S6	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	IPR020815	Small ribosomal subunit protein bS6, conserved site	Conserved Site
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	IPR000529	Small ribosomal subunit protein bS6	Family
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	IPR020814	Small ribosomal subunit protein bS6, plastid/chloroplast	Family
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
A, B, C [auth J], D [auth K], E [auth L], A, B, C [auth J], D [auth K], E [auth L], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7BFD | pdb_00007bfd

Circular permutant of ribosomal protein S6, P54-55 truncated, Y4A mutant.

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage