TRAPPCore plus C8 (355-596) and C11 (1-718) from MiniTRAPPIII
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8103416 | 3001668 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | SNARE-like | 8103528 | 3001113 | SCOP2B (2022-06-29) |
| D | SCOP2 Family | Sybindin-like | 8103523 | 4004434 | SCOP2 (2022-06-29) |
| D | SCOP2 Superfamily | SNARE-like | 8103524 | 3001113 | SCOP2 (2022-06-29) |
| C | SCOP2B Superfamily | SNARE-like | 8103522 | 3001113 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8103526 | 3001668 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Ligand-binding domain in the NO signalling and Golgi transport | 8103526 | 3001668 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| H | PsbY | e7b70H1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| F | PsbY | e7b70F1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| E | PsbY | e7b70E1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| D | PsbY | e7b70D1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| C | PsbY | e7b70C1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| B | PsbY | e7b70B1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| G | PsbY | e7b70G1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
| A | PsbY | e7b70A1 | A: a/b three-layered sandwiches | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: PsbY | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF11817 | Foie gras liver health family 1 (Foie-gras_1) | Foie gras liver health family 1 | - | Repeat | |
| PF12739 | ER-Golgi trafficking TRAPP I complex 85 kDa subunit (TRAPPC-Trs85) | ER-Golgi trafficking TRAPP I complex 85 kDa subunit | - | Family | |
| PF04628 | Sedlin, N-terminal conserved region (Sedlin_N) | Sedlin, N-terminal conserved region | - | Family | |
| PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
| PF04628 | Sedlin, N-terminal conserved region (Sedlin_N) | Sedlin, N-terminal conserved region | - | Family | |
| PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family | |
| PF04099 | Sybindin-like family (Sybindin) | Sybindin-like family | - | Family | |
| PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family | |
| PF04051 | Transport protein particle (TRAPP) component (TRAPP) | Transport protein particle (TRAPP) component | - | Family |
