7B6A
BK Polyomavirus VP1 pentamer core (residues 30-299)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | Polyoma_coat | e7b6aAAA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
B [auth BBB] | Polyoma_coat | e7b6aBBB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
C [auth CCC] | Polyoma_coat | e7b6aCCC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
D [auth DDD] | Polyoma_coat | e7b6aDDD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
E [auth EEE] | Polyoma_coat | e7b6aEEE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Polyoma_coat | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | PF00718 | Polyomavirus coat protein (Polyoma_coat) | Polyomavirus coat protein | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR000662 | Capsid protein VP1,Polyomavirus | Family |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR036931 | Polyomavirus capsid protein VP1 superfamily | Homologous Superfamily |