Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth C]PF00073e7b5fC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00073ECOD (1.6)
B [auth D]PF02226e7b5fD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF02226ECOD (1.6)
C [auth A]PF00073e7b5fA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00073ECOD (1.6)
D [auth B]PF00073e7b5fB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: PF00073ECOD (1.6)
E [auth G]PF00129e7b5fG1 A: a+b two layersX: MHC antigen-recognition domain (From Topology)H: MHC antigen-recognition domain (From Topology)T: MHC antigen-recognition domainF: PF00129ECOD (1.6)
F [auth H]PF07654e7b5fH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C]PF00073picornavirus capsid protein (Rhv)picornavirus capsid proteinCAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.
Domain
B [auth D]PF02226Picornavirus coat protein (VP4) (Pico_P1A)Picornavirus coat protein (VP4)- Family
C [auth A]PF00073picornavirus capsid protein (Rhv)picornavirus capsid proteinCAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.
Domain
D [auth B]PF00073picornavirus capsid protein (Rhv)picornavirus capsid proteinCAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornavi ...CAUTION: This alignment is very weak. It can not be generated by clustalw. If a representative set is used for a seed, many so-called members are not recognised. The family should probably be split up into sub-families. Capsid proteins of picornaviruses. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids. They include rhinovirus (common cold) and poliovirus. Common structure is an 8-stranded beta sandwich. Variations (one or two extra strands) occur.
Domain
E [auth G]PF00129Class I Histocompatibility antigen, domains alpha 1 and 2 (MHC_I)Class I Histocompatibility antigen, domains alpha 1 and 2- Domain
F [auth H]PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]Echovirus 18 viral protein 3
B [auth D]Echovirus 18 viral protein 4
C [auth A]Echovirus 18 viral protein 1
D [auth B]Echovirus 18 viral protein 2
E [auth G]IgG receptor FcRn large subunit p51
F [auth H]Beta-2-microglobulin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
A [auth C]IPR002527Picornavirus 2B proteinDomain
A [auth C]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
A [auth C]IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
A [auth C]IPR003593AAA+ ATPase domainDomain
A [auth C]IPR003138Picornavirus coat protein VP4Family
A [auth C]IPR000199Peptidase C3A/C3B, picornaviralDomain
A [auth C]IPR001676Picornavirus capsidDomain
A [auth C]IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
A [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth C]IPR000081Peptidase C3, picornavirus core protein 2ADomain
A [auth C]IPR029053Viral coat protein subunitHomologous Superfamily
A [auth C]IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth C]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A [auth C]IPR044067Picornavirales 3C/3C-like protease domainDomain
A [auth C]IPR033703Picornavirus/Calicivirus coat proteinDomain
A [auth C]IPR014838Poliovirus 3A protein-likeDomain
A [auth C]IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
A [auth C]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A [auth C]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A [auth C]IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
B [auth D]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
B [auth D]IPR002527Picornavirus 2B proteinDomain
B [auth D]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
B [auth D]IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
B [auth D]IPR003593AAA+ ATPase domainDomain
B [auth D]IPR003138Picornavirus coat protein VP4Family
B [auth D]IPR000199Peptidase C3A/C3B, picornaviralDomain
B [auth D]IPR001676Picornavirus capsidDomain
B [auth D]IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
B [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth D]IPR000081Peptidase C3, picornavirus core protein 2ADomain
B [auth D]IPR029053Viral coat protein subunitHomologous Superfamily
B [auth D]IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth D]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
B [auth D]IPR044067Picornavirales 3C/3C-like protease domainDomain
B [auth D]IPR033703Picornavirus/Calicivirus coat proteinDomain
B [auth D]IPR014838Poliovirus 3A protein-likeDomain
B [auth D]IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
B [auth D]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
B [auth D]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
B [auth D]IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
C [auth A]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
C [auth A]IPR002527Picornavirus 2B proteinDomain
C [auth A]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
C [auth A]IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
C [auth A]IPR003593AAA+ ATPase domainDomain
C [auth A]IPR003138Picornavirus coat protein VP4Family
C [auth A]IPR000199Peptidase C3A/C3B, picornaviralDomain
C [auth A]IPR001676Picornavirus capsidDomain
C [auth A]IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
C [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth A]IPR000081Peptidase C3, picornavirus core protein 2ADomain
C [auth A]IPR029053Viral coat protein subunitHomologous Superfamily
C [auth A]IPR009003Peptidase S1, PA clanHomologous Superfamily
C [auth A]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
C [auth A]IPR044067Picornavirales 3C/3C-like protease domainDomain
C [auth A]IPR033703Picornavirus/Calicivirus coat proteinDomain
C [auth A]IPR014838Poliovirus 3A protein-likeDomain
C [auth A]IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
C [auth A]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
C [auth A]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
C [auth A]IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
D [auth B]IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
D [auth B]IPR002527Picornavirus 2B proteinDomain
D [auth B]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
D [auth B]IPR036988Picornavirus coat protein VP4 superfamilyHomologous Superfamily
D [auth B]IPR003593AAA+ ATPase domainDomain
D [auth B]IPR003138Picornavirus coat protein VP4Family
D [auth B]IPR000199Peptidase C3A/C3B, picornaviralDomain
D [auth B]IPR001676Picornavirus capsidDomain
D [auth B]IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
D [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth B]IPR000081Peptidase C3, picornavirus core protein 2ADomain
D [auth B]IPR029053Viral coat protein subunitHomologous Superfamily
D [auth B]IPR009003Peptidase S1, PA clanHomologous Superfamily
D [auth B]IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
D [auth B]IPR044067Picornavirales 3C/3C-like protease domainDomain
D [auth B]IPR033703Picornavirus/Calicivirus coat proteinDomain
D [auth B]IPR014838Poliovirus 3A protein-likeDomain
D [auth B]IPR036203Poliovirus core protein 3a, soluble domainHomologous Superfamily
D [auth B]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
D [auth B]IPR007094RNA-directed RNA polymerase, catalytic domainDomain
D [auth B]IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
E [auth G]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth G]IPR037055MHC class I-like antigen recognition-like superfamilyHomologous Superfamily
E [auth G]IPR003597Immunoglobulin C1-setDomain
E [auth G]IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth G]IPR011161MHC class I-like antigen recognition-likeDomain
E [auth G]IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
E [auth G]IPR007110Immunoglobulin-like domainDomain
E [auth G]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
F [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
F [auth H]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
F [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
F [auth H]IPR007110Immunoglobulin-like domainDomain
F [auth H]IPR003597Immunoglobulin C1-setDomain
F [auth H]IPR015707Beta-2-MicroglobulinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth G]PharosP55899
F [auth H]PharosP61769