7AX3 | pdb_00007ax3

CryoEM structure of the super-constricted two-start dynamin 1 filament


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Z [auth V]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
Z [auth V]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
Z [auth V]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
Y [auth U]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
Y [auth U]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
Y [auth U]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
X [auth T]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
X [auth T]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
X [auth T]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
W [auth S]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
W [auth S]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
W [auth S]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
V [auth R]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
V [auth R]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
V [auth R]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
U [auth Q]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
T [auth P]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
T [auth P]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
T [auth P]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
S [auth O]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
S [auth O]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
S [auth O]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
R [auth N]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
R [auth N]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
R [auth N]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
O [auth K]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
O [auth K]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
O [auth K]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
N [auth J]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
M [auth I]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
L [auth H]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
L [auth H]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
L [auth H]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
K [auth G]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
K [auth G]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
K [auth G]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
JA [auth J2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
JA [auth J2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
JA [auth J2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
J [auth F]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
IA [auth I2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
IA [auth I2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
IA [auth I2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
HA [auth H2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
HA [auth H2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
HA [auth H2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
GA [auth G2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
GA [auth G2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
GA [auth G2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
FA [auth F2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
FA [auth F2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
FA [auth F2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
EA [auth E2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
EA [auth E2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
EA [auth E2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
DA [auth Z]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
DA [auth Z]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
DA [auth Z]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
D [auth B2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
D [auth B2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
D [auth B2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
CA [auth Y]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
CA [auth Y]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
CA [auth Y]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
C [auth A2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
C [auth A2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
C [auth A2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
BA [auth X]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
BA [auth X]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
BA [auth X]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
B [auth D2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
B [auth D2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
B [auth D2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
AA [auth W]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
AA [auth W]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
AA [auth W]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
A [auth C2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
A [auth C2]SCOP2B SuperfamilyDynamin stalk-like 8058469 3002023 SCOP2B (2022-06-29)
A [auth C2]SCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth V]e7ax3V1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
Y [auth U]e7ax3U1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
X [auth T]e7ax3T1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
W [auth S]e7ax3S1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
V [auth R]e7ax3R1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
U [auth Q]e7ax3Q1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
T [auth P]e7ax3P1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
S [auth O]e7ax3O1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
R [auth N]e7ax3N1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
Q [auth M]e7ax3M1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
P [auth L]e7ax3L1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
O [auth K]e7ax3K1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
N [auth J]e7ax3J1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
M [auth I]e7ax3I1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
L [auth H]e7ax3H1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
K [auth G]e7ax3G1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
JA [auth J2]e7ax3J21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
J [auth F]e7ax3F1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
IA [auth I2]e7ax3I21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
I [auth E]e7ax3E1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
HA [auth H2]e7ax3H21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
H [auth D]e7ax3D1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
GA [auth G2]e7ax3G21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
G [auth C]e7ax3C1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
FA [auth F2]e7ax3F21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
F [auth B]e7ax3B1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
EA [auth E2]e7ax3E21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
E [auth A]e7ax3A1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
DA [auth Z]e7ax3Z1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
D [auth B2]e7ax3B21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
CA [auth Y]e7ax3Y1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
C [auth A2]e7ax3A21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
BA [auth X]e7ax3X1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
B [auth D2]e7ax3D21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
AA [auth W]e7ax3W1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)
A [auth C2]e7ax3C21 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: SerpinF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01031Dynamin central region (Dynamin_M)Dynamin central region- Family
PF00350Dynamin family (Dynamin_N)Dynamin familyDomain
PF02212Dynamin GTPase effector domain (GED)Dynamin GTPase effector domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Dynamin-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020850GTPase effector domainDomain
IPR001849Pleckstrin homology domainDomain
IPR001401Dynamin, GTPase domainDomain
IPR045063Dynamin, N-terminalDomain
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
IPR011993PH-like domain superfamilyHomologous Superfamily
IPR019762Dynamin, GTPase region, conserved siteConserved Site
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR003130Dynamin GTPase effectorDomain
IPR000375Dynamin stalk domainDomain
IPR022812DynaminFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ05193