7ATP | pdb_00007atp

2.0 angstrom structure in complex with Ca of plant Extended Synaptotagmin 1, C2A domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lys	e7atpA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lys	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00168	C2 domain (C2)	C2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Synaptotagmin-1	binding lipid binding diacylglycerol binding phospholipid binding phosphatidylinositol phosphate binding cation binding ion binding metal ion binding small molecule binding	response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus localization import into cell transport cellular process endocytosis establishment of localization vesicle-mediated transport macromolecule localization lipid localization response to stimulus response to stress response to abiotic stimulus response to cold response to temperature stimulus localization import into cell transport cellular process endocytosis establishment of localization vesicle-mediated transport macromolecule localization lipid localization lipid transport establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane protein targeting to membrane transport of virus in host, cell to cell transport of virus in multicellular host biological process involved in interspecies interaction between organisms migration in host viral process transport of virus biological process involved in interaction with host biological process involved in symbiotic interaction endoplasmic reticulum-plasma membrane tethering membrane docking endoplasmic reticulum localization endoplasmic reticulum organization cellular component organization organelle localization by membrane tethering organelle organization organelle localization cellular component organization or biogenesis endomembrane system organization response to mechanical stimulus response to external stimulus response to other organism response to external biotic stimulus response to virus response to biotic stimulus membrane organization wound healing plasma membrane repair plasma membrane organization response to wounding intracellular transport endocytic recycling endosomal transport vesicle-mediated transport to the plasma membrane establishment of localization in cell	cell periphery cellular anatomical structure plasma membrane membrane endoplasmic reticulum-plasma membrane contact site organelle membrane contact site organelle membrane-bounded organelle intracellular organelle intracellular anatomical structure plant-type vacuole vacuole cytoplasm intracellular membrane-bounded organelle cell periphery cellular anatomical structure plasma membrane membrane endoplasmic reticulum-plasma membrane contact site organelle membrane contact site organelle membrane-bounded organelle intracellular organelle intracellular anatomical structure plant-type vacuole vacuole cytoplasm intracellular membrane-bounded organelle cell cortex cortical endoplasmic reticulum organelle subcompartment endomembrane system endoplasmic reticulum subcompartment endoplasmic reticulum endoplasmic reticulum tubular network endosome intracellular vesicle cytoplasmic vesicle vesicle endosome membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane organelle membrane cell-cell junction symplast anchoring junction cell junction plasmodesma cytoplasmic side of plasma membrane cytoplasmic side of membrane side of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR031468	Synaptotagmin-like mitochondrial-lipid-binding domain	Domain
A	IPR000008	C2 domain	Domain
A	IPR039010	Synaptotagmin, SMP domain	Domain
A	IPR045050	Synaptotagmin, plant	Family
A	IPR035892	C2 domain superfamily	Homologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A	OPM	Monotopic/peripheral	All beta monotopic/peripheral	C2 domain	C2 domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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