7AR7

Cryo-EM structure of Arabidopsis thaliana complex-I (open conformation)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyNqo6/HydA N-terminal domain-like8101623 3002291 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyNADH-quinone oxidoreductase subunit 11-like8101595 3002200 SCOP2B (2022-06-29)
S [auth T]SCOP2B SuperfamilyACP-like8101545 3001805 SCOP2B (2022-06-29)
P [auth Q]SCOP2B SuperfamilyNADH-ubiquinone oxidoreductase-like8101739 3002258 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyThioredoxin-like8101737 3000031 SCOP2B (2022-06-29)
T [auth U]SCOP2B SuperfamilyACP-like8101483 3001805 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyHydB/Nqo4-like8101589 3001849 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyThioredoxin-like8101475 3000031 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPF01058e7ar7B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: PF01058ECOD (1.6)
JPF00499e7ar7J1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: PF00499ECOD (1.6)
KPF00420e7ar7K1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: PF00420ECOD (1.6)
S [auth T]PF00550e7ar7T1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
GA [auth j]F_UNCLASSIFIEDe7ar7j1 A: extended segmentsX: Mitochondrial complex I, AGGG subunit (From Topology)H: Mitochondrial complex I, AGGG subunit (From Topology)T: Mitochondrial complex I, AGGG subunitF: F_UNCLASSIFIEDECOD (1.6)
APF00507e7ar7A1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: PF00507ECOD (1.6)
LPF00361,PF00662e7ar7L1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361,PF00662ECOD (1.6)
MPF00361e7ar7M1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361ECOD (1.6)
NPF00361e7ar7N1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: PF00361ECOD (1.6)
O [auth P]PF01370e7ar7P1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: PF01370ECOD (1.6)
P [auth Q]PF04800e7ar7Q1 A: a+b two layersX: Putative oxidoreductase (From Topology)H: Putative oxidoreductase (From Topology)T: Putative oxidoreductaseF: PF04800ECOD (1.6)
Q [auth R]PF10276e7ar7R1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: PF10276ECOD (1.6)
R [auth S]PF05047e7ar7S1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF05047ECOD (1.6)
T [auth U]PF00550e7ar7U1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PF00550ECOD (1.6)
V [auth W]F_UNCLASSIFIEDe7ar7W1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: F_UNCLASSIFIEDECOD (1.6)
W [auth X]F_UNCLASSIFIEDe7ar7X1 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: F_UNCLASSIFIEDECOD (1.6)
W [auth X]PF06747e7ar7X2 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: PF06747ECOD (1.6)
X [auth Z]PF06212e7ar7Z1 A: extended segmentsX: Mitochondrial complex I, B16.6 subunit (From Topology)H: Mitochondrial complex I, B16.6 subunit (From Topology)T: Mitochondrial complex I, B16.6 subunitF: PF06212ECOD (1.6)
Y [auth a]PF15879e7ar7a1 A: extended segmentsX: Mitochondrial complex I, MWFE subunit (From Topology)H: Mitochondrial complex I, MWFE subunit (From Topology)T: Mitochondrial complex I, MWFE subunitF: PF15879ECOD (1.6)
CA [auth e]PF10200e7ar7e1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: CHCH domain (From Topology)T: CHCH domainF: PF10200ECOD (1.6)
CPF00329e7ar7C1 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: PF00329ECOD (1.6)
KA [auth n]PF05347e7ar7n1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: PF05347ECOD (1.6)
DPF00346e7ar7D2 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: PF00346ECOD (1.6)
DPF00346e7ar7D1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: PF00346ECOD (1.6)
NA [auth q]PF05071e7ar7q1 A: a+b three layersX: Mitochondrial complex I, B17.2 subunit (From Topology)H: Mitochondrial complex I, B17.2 subunit (From Topology)T: Mitochondrial complex I, B17.2 subunitF: PF05071ECOD (1.6)
RA [auth x]F_UNCLASSIFIEDe7ar7x1 A: beta duplicates or obligate multimersX: Single-stranded left-handed beta-helixH: Trimeric LpxA-like enzymes (From Topology)T: Trimeric LpxA-like enzymesF: F_UNCLASSIFIEDECOD (1.6)
EPF01257e7ar7E1 A: alpha bundlesX: NQO2 helical bundle domain (From Topology)H: NQO2 helical bundle domain (From Topology)T: NQO2 helical bundle domainF: PF01257ECOD (1.6)
EPF01257e7ar7E2 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: PF01257ECOD (1.6)
FPF10589e7ar7F1 A: alpha bundlesX: Bromodomain-likeH: Nqo1C-terminal domain-like (From Topology)T: Nqo1C-terminal domain-likeF: PF10589ECOD (1.6)
FPF22461e7ar7F2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Nqo1 middle domain-likeF: PF22461ECOD (1.6)
FPF01512e7ar7F3 A: a/b three-layered sandwichesX: Nqo1 FMN-binding domain-like (From Topology)H: Nqo1 FMN-binding domain-like (From Topology)T: Nqo1 FMN-binding domain-likeF: PF01512ECOD (1.6)
GPF22117e7ar7G2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF22117ECOD (1.6)
GPF13510e7ar7G5 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: PF13510ECOD (1.6)
GPF22151e7ar7G4 A: a+b two layersX: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)H: Formate dehydrogenase/DMSO reductase, domain 1 (From Topology)T: Formate dehydrogenase/DMSO reductase, domain 1F: PF22151ECOD (1.6)
GPF00384e7ar7G3 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384ECOD (1.6)
GPF00384,PF09326e7ar7G1 A: a/b three-layered sandwichesX: Rossmann-likeH: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)T: Formate dehydrogenase/DMSO reductase, domains 2 and 3F: PF00384,PF09326ECOD (1.6)
GPF10588e7ar7G6 A: extended segmentsX: iron-sulfur center-binding helical hairpin (From Topology)H: iron-sulfur center-binding helical hairpin (From Topology)T: iron-sulfur center-binding helical hairpinF: PF10588ECOD (1.6)
HPF00146e7ar7H1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: PF00146ECOD (1.6)
IPF00037e7ar7I1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: PF00037ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
S [auth T]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
FA [auth i]PF17250NADH-ubiquinone oxidoreductase 11 kDa subunit (NDUFB11)NADH-ubiquinone oxidoreductase 11 kDa subunit- Family
SA [auth y]PF00132Bacterial transferase hexapeptide (six repeats) (Hexapep)Bacterial transferase hexapeptide (six repeats)- Repeat
PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
PF06455NADH dehydrogenase subunit 5 C-terminus (NADH5_C)NADH dehydrogenase subunit 5 C-terminus- Family
PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
O [auth P]PF01370NAD dependent epimerase/dehydratase family (Epimerase)NAD dependent epimerase/dehydratase family- Family
P [auth Q]PF04800NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)NADH dehydrogenase ubiquinone Fe-S protein 4- Family
Q [auth R]PF10276Zinc-finger domain (zf-CHCC)Zinc-finger domainThis is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C.Domain
R [auth S]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
T [auth U]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.
Domain
U [auth V]PF04716ETC complex I subunit conserved region (ETC_C1_NDUFA5)ETC complex I subunit conserved region- Family
W [auth X]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
X [auth Z]PF06212GRIM-19 protein (GRIM-19)GRIM-19 protein- Family
Y [auth a]PF15879NADH-ubiquinone oxidoreductase MWFE subunit (MWFE)NADH-ubiquinone oxidoreductase MWFE subunit- Family
CA [auth e]PF10200NADH:ubiquinone oxidoreductase, NDUFS5-15kDa (Ndufs5)NADH:ubiquinone oxidoreductase, NDUFS5-15kDa- Family
PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunit- Family
DA [auth f]PF10785NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit (NADH-u_ox-rdase)NADH-ubiquinone oxidoreductase complex I, 21 kDa subunitThis family is the N-terminal domain of NADH-ubiquinone oxidoreductase 21 kDa subunits from fungi, lower metazoa and plants.Domain
HA [auth k]PF08122NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12)NADH-ubiquinone oxidoreductase B12 subunit family- Family
LA [auth o]PF05676NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7)NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7)- Family
MA [auth p]PF10249NADH-ubiquinone oxidoreductase subunit 10 (NDUFB10)NADH-ubiquinone oxidoreductase subunit 10- Family
PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
NA [auth q]PF05071NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12)NADH ubiquinone oxidoreductase subunit NDUFA12- Family
PF01257Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)Thioredoxin-like [2Fe-2S] ferredoxin- Family
PF10531SLBB domain (SLBB)SLBB domain- Domain
PF01512Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K)Respiratory-chain NADH dehydrogenase 51 Kd subunit- Family
PF10589NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)NADH-ubiquinone oxidoreductase-F iron-sulfur binding region- Domain
PF00384Molybdopterin oxidoreductase (Molybdopterin)Molybdopterin oxidoreductase- Family
PF09326NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)NADH-ubiquinone oxidoreductase subunit G, C-terminal- Family
PF135102Fe-2S iron-sulfur cluster binding domain (Fer2_4)2Fe-2S iron-sulfur cluster binding domainThe 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. Th ...The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.
Domain
PF10588NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)NADH-ubiquinone oxidoreductase-G iron-sulfur binding region- Domain
PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial -
NADH-ubiquinone oxidoreductase chain 6 -
NADH-ubiquinone oxidoreductase chain 4L
S [auth T]Acyl carrier protein 1, mitochondrial
Z [auth b]At2g46540/F11C10.23- -
AA [auth c]Transmembrane protein-
FA [auth i]At1g67350-
GA [auth j]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2- -
JA [auth m]AT2G31490 protein-
PA [auth u]unknown---
SA [auth y]Gamma carbonic anhydrase 2, mitochondrial
NADH-ubiquinone oxidoreductase chain 3 -
NADH-ubiquinone oxidoreductase chain 5
NADH-ubiquinone oxidoreductase chain 4
NADH-ubiquinone oxidoreductase chain 2
O [auth P]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial- -
P [auth Q]NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Q [auth R]NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-
R [auth S]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2- -
T [auth U]Acyl carrier protein 2, mitochondrial
U [auth V]Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial-
V [auth W]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6- -
W [auth X]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-
X [auth Z]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A-
Y [auth a]NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1- -
BA [auth d]Excitatory amino acid transporter- -
CA [auth e]NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-A-
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3 -
DA [auth f]At4g16450-
EA [auth g]ESSS subunit of NADH:ubiquinone oxidoreductase (Complex I) protein- -
HA [auth k]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A-
IA [auth l]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial- -
KA [auth n]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-
LA [auth o]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-
MA [auth p]NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
NA [auth q]Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
OA [auth r]B14.5a---
QA [auth v]Uncharacterized protein At2g27730, mitochondrial
RA [auth x]Gamma carbonic anhydrase-like 2, mitochondrial
TA [auth z]Gamma carbonic anhydrase 1, mitochondrial
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial -
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial -
NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
NADH-ubiquinone oxidoreductase chain 1
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
S [auth T]IPR006162Phosphopantetheine attachment sitePTM
S [auth T]IPR009081Phosphopantetheine binding ACP domainDomain
S [auth T]IPR036736ACP-like superfamilyHomologous Superfamily
S [auth T]IPR003231Acyl carrier proteinFamily
FA [auth i]IPR035204NADH-ubiquinone oxidoreductase 11kDa subunitFamily
GA [auth j]IPR044980NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, plant/fungiFamily
SA [auth y]IPR047324Gamma carbonic anhydrase-likeFamily
SA [auth y]IPR001451Hexapeptide repeatRepeat
SA [auth y]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
IPR010934NADH dehydrogenase subunit 5, C-terminalDomain
IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
IPR003918NADH:ubiquinone oxidoreductaseFamily
IPR010227NADH-quinone oxidoreductase, chain M/4Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
O [auth P]IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
O [auth P]IPR001509NAD-dependent epimerase/dehydrataseDomain
P [auth Q]IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyHomologous Superfamily
P [auth Q]IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-likeFamily
Q [auth R]IPR019401Zinc finger, CHCC-typeDomain
Q [auth R]IPR016668NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialFamily
R [auth S]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
R [auth S]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
R [auth S]IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2Family
T [auth U]IPR006162Phosphopantetheine attachment sitePTM
T [auth U]IPR009081Phosphopantetheine binding ACP domainDomain
T [auth U]IPR036736ACP-like superfamilyHomologous Superfamily
T [auth U]IPR003231Acyl carrier proteinFamily
U [auth V]IPR006806NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5Family
V [auth W]IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6Family
V [auth W]IPR045299NDUFA6, LYR domainDomain
W [auth X]IPR010625CHCHDomain
W [auth X]IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8Family
X [auth Z]IPR009346GRIM-19Family
Y [auth a]IPR017384NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1Family
CA [auth e]IPR019342NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5Family
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
IPR010218NADH dehydrogenase, subunit CFamily
DA [auth f]IPR019721NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminalDomain
HA [auth k]IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3Family
IA [auth l]IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialFamily
KA [auth n]IPR033034NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9Family
KA [auth n]IPR045292NDUFB9, LYR domainDomain
LA [auth o]IPR008698NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, NDUB7Family
MA [auth p]IPR019377NADH-ubiquinone oxidoreductase, subunit 10Family
MA [auth p]IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10Family
IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
IPR001135NADH-quinone oxidoreductase, subunit DDomain
NA [auth q]IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12Family
QA [auth v]IPR045284At2g27730-likeFamily
RA [auth x]IPR047324Gamma carbonic anhydrase-likeFamily
RA [auth x]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
TA [auth z]IPR047324Gamma carbonic anhydrase-likeFamily
TA [auth z]IPR011004Trimeric LpxA-like superfamilyHomologous Superfamily
IPR042128NuoE domainDomain
IPR002023NADH-quinone oxidoreductase subunit E-likeFamily
IPR041921NADH-quinone oxidoreductase subunit E, N-terminalHomologous Superfamily
IPR036249Thioredoxin-like superfamilyHomologous Superfamily
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainDomain
IPR019554Soluble ligand binding domainDomain
IPR011537NADH ubiquinone oxidoreductase, F subunitFamily
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved siteConserved Site
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyHomologous Superfamily
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyHomologous Superfamily
IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainDomain
IPR006963Molybdopterin oxidoreductase, 4Fe-4S domainDomain
IPR015405NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-likeDomain
IPR006656Molybdopterin oxidoreductaseDomain
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
IPR000283NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved siteConserved Site
IPR010228NADH:ubiquinone oxidoreductase, subunit GFamily
IPR019574NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur bindingDomain
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR010226NADH-quinone oxidoreductase, chain IFamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicElectron transport chain complex I (NADH dehydrogenase) and supercomplexesH+ or Na+ translocating NADH dehydrogenase

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM