7AQK

Model of the actin filament Arp2/3 complex branch junction in cells


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth c]SCOP2 FamilyWD40-repeat 8103529 4002744 SCOP2 (2022-06-29)
C [auth c]SCOP2 SuperfamilyWD40 repeat-like 8103530 3001694 SCOP2 (2022-06-29)
E [auth e]SCOP2 FamilyArp2/3 complex 21 kDa subunit ARPC3 8103511 4002866 SCOP2 (2022-06-29)
E [auth e]SCOP2 SuperfamilyArp2/3 complex 21 kDa subunit ARPC3 8103512 3001830 SCOP2 (2022-06-29)
F [auth f]SCOP2 FamilyArp2/3 complex subunits 8103395 4003389 SCOP2 (2022-06-29)
F [auth f]SCOP2 SuperfamilyArp2/3 complex subunits 8103396 3000751 SCOP2 (2022-06-29)
G [auth g]SCOP2 FamilyArp2/3 complex 16 kDa subunit ARPC5 8103501 4002906 SCOP2 (2022-06-29)
G [auth g]SCOP2 SuperfamilyArp2/3 complex 16 kDa subunit ARPC5 8103502 3001882 SCOP2 (2022-06-29)
H [auth h]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
H [auth h]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
O [auth o]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
O [auth o]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
I [auth i]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
I [auth i]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
J [auth j]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
J [auth j]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
K [auth k]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
K [auth k]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
L [auth l]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
L [auth l]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
M [auth m]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
M [auth m]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
N [auth n]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
N [auth n]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
P [auth p]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
P [auth p]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
Q [auth q]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)
Q [auth q]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
R [auth r]SCOP2B SuperfamilyActin-like ATPases 8082541 3000092 SCOP2B (2022-06-29)
R [auth r]SCOP2B SuperfamilyActin-like ATPases 8092419 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth b]Actin_1ste7aqkb2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
A [auth b]Actin_2nde7aqkb1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
B [auth a]Actin_1ste7aqka1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
B [auth a]Actin_2nde7aqka2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
C [auth c]ANAPC4_WD40_7e7aqkc1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_7ECOD (1.6)
D [auth d]P34-Arc_Ce7aqkd1 A: a+b two layersX: Type III secretory system chaperone-likeH: Arp2/3 complex subunits (From Topology)T: Arp2/3 complex subunitsF: P34-Arc_CECOD (1.6)
D [auth d]P34-Arc_Ne7aqkd2 A: a+b two layersX: Type III secretory system chaperone-likeH: Arp2/3 complex subunits (From Topology)T: Arp2/3 complex subunitsF: P34-Arc_NECOD (1.6)
E [auth e]P21-Arce7aqke1 A: alpha bundlesX: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology)H: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology)T: Arp2/3 complex 21 kDa subunit ARPC3F: P21-ArcECOD (1.6)
F [auth f]ARPC4e7aqkf1 A: a+b two layersX: Type III secretory system chaperone-likeH: Arp2/3 complex subunits (From Topology)T: Arp2/3 complex subunitsF: ARPC4ECOD (1.6)
G [auth g]P16-Arce7aqkg1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Arp2/3 complex 16 KDa subunit ARPC5 (From Topology)T: Arp2/3 complex 16 KDa subunit ARPC5F: P16-ArcECOD (1.6)
H [auth h]Actin_1ste7aqkh2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
H [auth h]Actin_2nde7aqkh1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
O [auth o]Actin_1ste7aqko1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
O [auth o]Actin_2nde7aqko2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
I [auth i]Actin_1ste7aqki2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
I [auth i]Actin_2nde7aqki1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
J [auth j]Actin_1ste7aqkj1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
J [auth j]Actin_2nde7aqkj2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
K [auth k]Actin_1ste7aqkk2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
K [auth k]Actin_2nde7aqkk1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
L [auth l]Actin_1ste7aqkl2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
L [auth l]Actin_2nde7aqkl1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
M [auth m]Actin_1ste7aqkm2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
M [auth m]Actin_2nde7aqkm1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
N [auth n]Actin_1ste7aqkn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
N [auth n]Actin_2nde7aqkn2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
P [auth p]Actin_1ste7aqkp2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
P [auth p]Actin_2nde7aqkp1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
Q [auth q]Actin_1ste7aqkq2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
Q [auth q]Actin_2nde7aqkq1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)
R [auth r]Actin_1ste7aqkr1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_1stECOD (1.6)
R [auth r]Actin_2nde7aqkr2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Actin_2ndECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth b]Actin-related protein 2, Arp2
B [auth a]Actin-related protein 3, Arp3
C [auth c]Actin-related protein 2/3 complex subunit 1b, ArpC1b
D [auth d]Actin-related protein 2/3 complex subunit 2, ArpC2
E [auth e]Actin-related protein 2/3 complex subunit 3, ArpC3
F [auth f]Actin-related protein 2/3 complex subunit 4, ArpC4
G [auth g]Actin-related protein 2/3 complex subunit 5, ArpC5
Actin, alpha skeletal muscle, ACTA1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth b]IPR020902Actin/actin-like conserved siteConserved Site
A [auth b]IPR043129ATPase, nucleotide binding domainHomologous Superfamily
A [auth b]IPR004000Actin familyFamily
B [auth a]IPR020902Actin/actin-like conserved siteConserved Site
B [auth a]IPR043129ATPase, nucleotide binding domainHomologous Superfamily
B [auth a]IPR004000Actin familyFamily
C [auth c]IPR017383Actin-related protein 2/3 complex subunit 1Family
C [auth c]IPR001680WD40 repeatRepeat
C [auth c]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth c]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth d]IPR007188Actin-related protein 2/3 complex subunit 2Family
D [auth d]IPR034666Arp2/3 complex subunit 2/4Homologous Superfamily
E [auth e]IPR007204Actin-related protein 2/3 complex subunit 3Family
E [auth e]IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyHomologous Superfamily
F [auth f]IPR034666Arp2/3 complex subunit 2/4Homologous Superfamily
F [auth f]IPR008384Actin-related protein 2/3 complex subunit 4Family
G [auth g]IPR006789Actin-related protein 2/3 complex subunit 5Family
G [auth g]IPR036743Actin-related protein 2/3 complex subunit 5 superfamilyHomologous Superfamily
IPR020902Actin/actin-like conserved siteConserved Site
IPR004001Actin, conserved siteConserved Site
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
IPR004000Actin familyFamily