7AMT
Structure of LuxR with DNA (activation)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00440 | e7amtB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
A [auth B] | F_UNCLASSIFIED | e7amtB2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | PF00440 | e7amtA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e7amtA2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00440 | Bacterial regulatory proteins, tetR family (TetR_N) | Bacterial regulatory proteins, tetR family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth B], B [auth A] | HTH-type transcriptional regulator LuxR | - | - | |
C [auth E] | DNA (5'-D(P*TP*AP*TP*AP*TP*AP*CP*AP*GP*TP*AP*AP*TP*GP*TP*CP*AP*TP*TP*AP*T)-3') | - | - | - |
D [auth F] | DNA (5'-D(P*AP*TP*AP*AP*TP*GP*AP*CP*AP*TP*TP*AP*CP*TP*GP*TP*AP*TP*AP*TP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR001647 | DNA-binding HTH domain, TetR-type | Domain |
A [auth B], B [auth A] | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR009057 | Homeobox-like domain superfamily | Homologous Superfamily |