7AE0 | pdb_00007ae0

Cryo-EM structure of an extracellular contractile injection system in marine bacterium Algoriphagus machipongonensis, the sheath-tube module in extended state.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth 4d]F_UNCLASSIFIEDe7ae04d1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
CA [auth 4e]F_UNCLASSIFIEDe7ae04e1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
FA [auth 5b]F_UNCLASSIFIEDe7ae05b1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
GA [auth 5c]F_UNCLASSIFIEDe7ae05c1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
IA [auth 5e]F_UNCLASSIFIEDe7ae05e1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
JA [auth 5f]F_UNCLASSIFIEDe7ae05f1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
T [auth 3b]F_UNCLASSIFIEDe7ae03b1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
W [auth 3e]F_UNCLASSIFIEDe7ae03e1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
X [auth 3f]F_UNCLASSIFIEDe7ae03f1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
Y [auth 4a]F_UNCLASSIFIEDe7ae04a1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
Z [auth 4b]F_UNCLASSIFIEDe7ae04b1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
V [auth 3d]F_UNCLASSIFIEDe7ae03d1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
U [auth 3c]F_UNCLASSIFIEDe7ae03c1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
S [auth 3a]F_UNCLASSIFIEDe7ae03a1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
HA [auth 5d]F_UNCLASSIFIEDe7ae05d1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
EA [auth 5a]F_UNCLASSIFIEDe7ae05a1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
DA [auth 4f]F_UNCLASSIFIEDe7ae04f1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
AA [auth 4c]F_UNCLASSIFIEDe7ae04c1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: F_UNCLASSIFIEDECOD (1.6)
B [auth 3B]Phage_sheath_1Ce7ae03B2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
B [auth 3B]Phage_sheath_1e7ae03B1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
C [auth 3C]Phage_sheath_1Ce7ae03C2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
C [auth 3C]Phage_sheath_1e7ae03C1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
E [auth 3E]Phage_sheath_1Ce7ae03E2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
E [auth 3E]Phage_sheath_1e7ae03E1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
F [auth 3F]Phage_sheath_1Ce7ae03F2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
F [auth 3F]Phage_sheath_1e7ae03F1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
G [auth 4A]Phage_sheath_1Ce7ae04A2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
G [auth 4A]Phage_sheath_1e7ae04A1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
H [auth 4B]Phage_sheath_1Ce7ae04B2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
H [auth 4B]Phage_sheath_1e7ae04B1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
I [auth 4C]Phage_sheath_1Ce7ae04C2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
I [auth 4C]Phage_sheath_1e7ae04C1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
J [auth 4D]Phage_sheath_1Ce7ae04D2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
J [auth 4D]Phage_sheath_1e7ae04D1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
K [auth 4E]Phage_sheath_1Ce7ae04E2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
K [auth 4E]Phage_sheath_1e7ae04E1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
L [auth 4F]Phage_sheath_1Ce7ae04F2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
L [auth 4F]Phage_sheath_1e7ae04F1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
M [auth 5A]Phage_sheath_1Ce7ae05A2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
M [auth 5A]Phage_sheath_1e7ae05A1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
N [auth 5B]Phage_sheath_1Ce7ae05B2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
N [auth 5B]Phage_sheath_1e7ae05B1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
O [auth 5C]Phage_sheath_1Ce7ae05C2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
O [auth 5C]Phage_sheath_1e7ae05C1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
Q [auth 5E]Phage_sheath_1Ce7ae05E2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
Q [auth 5E]Phage_sheath_1e7ae05E1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
R [auth 5F]Phage_sheath_1Ce7ae05F2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
R [auth 5F]Phage_sheath_1e7ae05F1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
P [auth 5D]Phage_sheath_1Ce7ae05D2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
P [auth 5D]Phage_sheath_1e7ae05D1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
D [auth 3D]Phage_sheath_1Ce7ae03D2 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
D [auth 3D]Phage_sheath_1e7ae03D1 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)
A [auth 3A]Phage_sheath_1Ce7ae03A1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: gpW/gp25-like (From Topology)T: gpW/gp25-likeF: Phage_sheath_1CECOD (1.6)
A [auth 3A]Phage_sheath_1e7ae03A2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Domain III of tail sheath protein Gp18 (From Topology)T: Domain III of tail sheath protein Gp18F: Phage_sheath_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17482Phage tail sheath C-terminal domain (Phage_sheath_1C)Phage tail sheath C-terminal domainThis entry represents the C-terminal domain in a variety of phage tail sheath proteins [4]. Domain
PF06841T4-like virus tail tube protein gp19 (Phage_T4_gp19)T4-like virus tail tube protein gp19- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Phage tail protein - -
Putative phage tail sheath protein FI- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011747Conserved hypothetical protein CHP02241Family
IPR010667Bacteriophage T4, Gp19, tail tubeFamily
IPR052042Tail sheath structural proteinFamily
IPR020287Tail sheath protein, C-terminal domainDomain