7ADP | pdb_00007adp

Cryo-EM structure of human ER membrane protein complex in GDN detergent


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
FSCOP2B SuperfamilyEMC6/GET2-like 8101858 3002721 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth H]F_UNCLASSIFIEDe7adpH1 A: a+b three layersX: Cytidine deaminase-like (From Topology)H: Cytidine deaminase-like (From Topology)T: Cytidine deaminase-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
H [auth I]PF21203ER membrane protein complex subunit 10 (ECM10)ER membrane protein complex subunit 10EMC10 is a component of the endoplasmic reticulum (ER) membrane protein complex (EMC), a conserved co- and post-translational insertase which enables the energy-independent insertion into ER membranes of newly synthesized membrane proteins [1-4]. It ...EMC10 is a component of the endoplasmic reticulum (ER) membrane protein complex (EMC), a conserved co- and post-translational insertase which enables the energy-independent insertion into ER membranes of newly synthesized membrane proteins [1-4]. It is involved in the co-translational insertion of multi-pass membrane proteins in which stop-transfer membrane-anchor sequences become ER membrane spanning helices. This complex controls the topology of multi-pass membrane proteins, such as G protein-coupled receptors [1,4]. This entry represents a conserved domain found in these proteins, which adopts a beta-sandwich fold.
Domain
PF07019EMC6 (EMC6)EMC6- Family
PF10270Membrane magnesium transporter (MMgT)Membrane magnesium transporter- Family
PF01956Integral membrane protein EMC3/TMCO1-like (EMC3_TMCO1)Integral membrane protein EMC3/TMCO1-like- Family
PF22890EMC2 TPR-like repeat domain (TPR_EMC2)EMC2 TPR-like repeat domain- Repeat
PF07774ER membrane protein complex subunit 1, C-terminal (EMC1_C)ER membrane protein complex subunit 1, C-terminalThis is the C-terminal domain of ER membrane protein complex subunit 1. ER membrane protein complex subunit 1 is a component of the ER membrane protein complex (EMC, composed of EMC1, EMC2, EMC3, EMC4, EMC5 and EMC6). In Saccharomyces cerevisiae, the ...This is the C-terminal domain of ER membrane protein complex subunit 1. ER membrane protein complex subunit 1 is a component of the ER membrane protein complex (EMC, composed of EMC1, EMC2, EMC3, EMC4, EMC5 and EMC6). In Saccharomyces cerevisiae, the EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER) [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H [auth I]ER membrane protein complex subunit 10-
G [auth H]ER membrane protein complex subunit 8-
ER membrane protein complex subunit 6-
Membrane magnesium transporter 1
ER membrane protein complex subunit 4-
ER membrane protein complex subunit 3-
ER membrane protein complex subunit 2-
ER membrane protein complex subunit 1-

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD