7A5K | pdb_00007a5k

Structure of the human mitoribosome in the post translocation state bound to mtEF-G1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth F3]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
L [auth L3]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
BA [auth 13]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
EA [auth 43]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
IA [auth 93]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
LB [auth J6]SCOP2B SuperfamilyNucleic acid-binding proteins 8095431 3000135 SCOP2B (2022-06-29)
SB [auth Q6]SCOP2B SuperfamilyRibosomal protein S21 8053089 3002159 SCOP2B (2022-06-29)
CC [auth a6]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8091481 3000334 SCOP2B (2022-06-29)
AC [auth Y6]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like 8090914 3002471 SCOP2B (2022-06-29)
TB [auth R6]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like 8051932 3002074 SCOP2B (2022-06-29)
MB [auth K6]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052599 3000068 SCOP2B (2022-06-29)
KB [auth I6]SCOP2B SuperfamilyTranslational machinery components 8098948 3000571 SCOP2B (2022-06-29)
DB [auth B6]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063850 3001397 SCOP2B (2022-06-29)
O [auth O3]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
K [auth K3]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth D3]Ribosomal_L2e7a5kD31 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
E [auth D3]Ribosomal_L2_Ce7a5kD32 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
G [auth F3]Ribosomal_L4e7a5kF31 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
L [auth L3]Ribosomal_L14e7a5kL31 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
M [auth M3]Ribosomal_L27Ae7a5kM31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
Q [auth Q3]Ribosomal_L19e7a5kQ31 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
S [auth S3]Ribosomal_L21pe7a5kS31 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
U [auth U3]Ribosomal_L23_2e7a5kU31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
Y [auth Y3]MRP-L47e7a5kY31 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
AA [auth 03]KOG4080e7a5k031 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
BA [auth 13]Ribosomal_L33e7a5k131 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
DA [auth 33]Ribosomal_L35pe7a5k331 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
EA [auth 43]Ribosomal_L36e7a5k431 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
GA [auth 63]PBPe7a5k631 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
IA [auth 93]MRP-L27e7a5k931 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
LA [auth c3]Ribonucleas_3_3e7a5kc32 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
LA [auth c3]dsrme7a5kc31 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
PA [auth g3]Img2e7a5kg31 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
QA [auth h3]Ribosomal_L50e7a5kh31 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
SA [auth j3]EUF08791e7a5kj31 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
VA [auth m3]Mitoc_L55e7a5km31 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
WA [auth o3]MRP-63e7a5ko31 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
XA [auth p3]RF-1_Ne7a5kp31 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
YA [auth q3]CR6_interacte7a5kq31 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
EB [auth C6]MRP-S24e7a5kC61 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: MRP-S24ECOD (1.6)
IB [auth G6]Ribosomal_S9e7a5kG61 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
JB [auth H6]Ribosomal_S10_2e7a5kH61 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
LB [auth J6]Ribosom_S12_S23e7a5kJ61 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
NB [auth L6]Ribosomal_S15_1e7a5kL61 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
QB [auth O6]Ribosomal_S18e7a5kO61 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
RB [auth P6]Ribosomal_S18e7a5kP61 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SB [auth Q6]Ribosomal_S21_2e7a5kQ61 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: Ribosomal_S21_2ECOD (1.6)
UB [auth S6]MRP-S23e7a5kS61 A: alpha arraysX: RuvA-CH: Mitoribosomal protein mS23 (From Topology)T: Mitoribosomal protein mS23F: MRP-S23ECOD (1.6)
YB [auth W6]MRP-S35e7a5kW61 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: MRP-S35ECOD (1.6)
ZB [auth X6]DAP3_C,DAP3_Ne7a5kX61 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: DAP3_C,DAP3_NECOD (1.6)
BC [auth Z6]MRP-S33e7a5kZ61 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: MRP-S33ECOD (1.6)
EC [auth c6]KOG4695e7a5kc61 A: few secondary structure elementsX: p8-MTCP1-related (From Topology)H: p8-MTCP1-related (From Topology)T: p8-MTCP1-relatedF: KOG4695ECOD (1.6)
I [auth I3]Ribosomal_L10e7a5kI31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
NC [auth n]Ribosomal_L1_2nd_2e7a5kn1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_2ECOD (1.6)
NC [auth n]Ribosomal_L1_1st_2e7a5kn2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_2ECOD (1.6)
KC [auth A]MRP-L28e7a5kA1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)
FC [auth d6]DUF1713e7a5kd61 A: extended segmentsX: Mitoribosomal protein mS38 (From Topology)H: Mitoribosomal protein mS38 (From Topology)T: Mitoribosomal protein mS38F: DUF1713ECOD (1.6)
DC [auth b6]F_UNCLASSIFIEDe7a5kb61 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: F_UNCLASSIFIEDECOD (1.6)
CC [auth a6]MRP-S34e7a5ka61 A: beta barrelsX: SH3H: Mitoribosomal protein mS34 (From Topology)T: Mitoribosomal protein mS34F: MRP-S34ECOD (1.6)
H [auth H3]Ribosomal_L9_N_1e7a5kH31 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
LC [auth D]F_UNCLASSIFIEDe7a5kD1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: F_UNCLASSIFIEDECOD (1.6)
AC [auth Y6]MRP-S31e7a5kY61 A: extended segmentsX: Mitoribosomal protein mS31 (From Topology)H: Mitoribosomal protein mS31 (From Topology)T: Mitoribosomal protein mS31F: MRP-S31ECOD (1.6)
XB [auth V6]MRP-S27e7a5kV61 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: MRP-S27ECOD (1.6)
WB [auth U6]MRP-S26e7a5kU61 A: extended segmentsX: Mitoribosomal protein mS26 (From Topology)H: Mitoribosomal protein mS26 (From Topology)T: Mitoribosomal protein mS26F: MRP-S26ECOD (1.6)
VB [auth T6]L51_S25_CI-B8e7a5kT61 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
TB [auth R6]MRP-S22e7a5kR61 A: a+b complex topologyX: Mitoribosomal protein mS22 (From Topology)H: Mitoribosomal protein mS22 (From Topology)T: Mitoribosomal protein mS22F: MRP-S22ECOD (1.6)
PB [auth N6]Ribosomal_S17_1e7a5kN61 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
OB [auth M6]Ribosomal_S16e7a5kM61 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
MB [auth K6]Ribosomal_S14_1e7a5kK61 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_1ECOD (1.6)
KB [auth I6]Ribosomal_S11e7a5kI61 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
HB [auth F6]Ribosomal_S7e7a5kF61 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
F [auth E3]Ribosomal_L3e7a5kE31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
GB [auth E6]Ribosomal_S6_1e7a5kE61 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6_1ECOD (1.6)
FB [auth D6]Ribosomal_S5_Ce7a5kD62 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
FB [auth D6]Ribosomal_S5_1e7a5kD61 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_1ECOD (1.6)
FB [auth D6]KOG2646e7a5kD63 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: KOG2646ECOD (1.6)
DB [auth B6]Ribosomal_S2_1e7a5kB61 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_1ECOD (1.6)
AB [auth s3]PDCD9e7a5ks31 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
ZA [auth r3]Ribosomal_S18e7a5kr31 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
TA [auth k3]MRP_L53e7a5kk31 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
RA [auth i3]MRP-L51e7a5ki31 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
OA [auth f3]Ribosomal_S10_2e7a5kf31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
NA [auth e3]MRP-L46e7a5ke31 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
MA [auth d3]Tim44e7a5kd31 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
KA [auth b3]L51_S25_CI-B8e7a5kb31 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
JA [auth a3]MRP-S32e7a5ka31 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
HA [auth 73]TGSe7a5k732 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
HA [auth 73]tRNA_SADe7a5k731 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
FA [auth 53]PDCD9e7a5k531 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
CA [auth 23]Ribosomal_L34e7a5k231 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
Z [auth Z3]Ribosomal_L30e7a5kZ31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
X [auth X3]Ribosomal_L28_1e7a5kX31 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
W [auth W3]Ribosomal_L27e7a5kW31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
V [auth V3]ribosomal_L24_1e7a5kV31 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
T [auth T3]Ribosomal_L22e7a5kT31 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
R [auth R3]Ribosomal_L20e7a5kR31 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
P [auth P3]Ribosomal_L18pe7a5kP31 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
O [auth O3]Ribosomal_L17e7a5kO31 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
N [auth N3]Ribosomal_L16e7a5kN31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
K [auth K3]Ribosomal_L13e7a5kK31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
J [auth J3]Ribosomal_L11e7a5kJ31 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
J [auth J3]Ribosomal_L11_Ne7a5kJ32 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
A [auth r1]GTP_EFTU_D2e7a5kr13 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
A [auth r1]EFG_IVe7a5kr15 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
A [auth r1]EFG_Ce7a5kr12 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
A [auth r1]EFG_IIe7a5kr14 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
A [auth r1]MnmE_helical_2nde7a5kr11 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth D3]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
E [auth D3]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].
Domain
E [auth D3]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
G [auth F3]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
G [auth F3]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth L3]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
M [auth M3]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
Q [auth Q3]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
S [auth S3]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
U [auth U3]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Y [auth Y3]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
AA [auth 03]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
DA [auth 33]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
GA [auth 63]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding proteinDomain
EB [auth C6]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
EB [auth C6]PF06747CHCH domain (CHCH)CHCH domainwe have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ...we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extended) and C (C-terminal extended) subgroups. All three sub-groups of proteins have in common that they contain a predicted conserved [coiled coil 1]-[helix 1]-[coiled coil 2]-[helix 2] domain (CHCH domain). Within each helix of the CHCH domain, there are two cysteines present in a C-X9-C motif. The N-group contains an additional double helix domain, and each helix contains the C-X9-C motif. This family contains a number of characterised proteins: Cox19 protein - a nuclear gene of Saccharomyces cerevisiae, codes for an 11-kDa protein (Cox19p) required for expression of cytochrome oxidase. Because cox19 mutants are able to synthesise the mitochondrial and nuclear gene products of cytochrome oxidase, Cox19p probably functions post-translationally during assembly of the enzyme. Cox19p is present in the cytoplasm and mitochondria, where it exists as a soluble intermembrane protein. This dual location is similar to what was previously reported for Cox17p, a low molecular weight copper protein thought to be required for maturation of the CuA centre of subunit 2 of cytochrome oxidase. Cox19p have four conserved potential metal ligands, these are three cysteines and one histidine. Mrp10 - belongs to the class of yeast mitochondrial ribosomal proteins that are essential for translation [2]. Eukaryotic NADH-ubiquinone oxidoreductase 19 kDa (NDUFA8) subunit [3]. The CHCH domain was previously called DUF657 [4].
Domain
IB [auth G6]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JB [auth H6]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
LB [auth J6]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
NB [auth L6]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
QB [auth O6]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
RB [auth P6]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SB [auth Q6]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
UB [auth S6]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
ZB [auth X6]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
BC [auth Z6]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
I [auth I3]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
I [auth I3]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
KC [auth A]PF09812Mitochondrial ribosomal protein L28 (MRP-L28)Mitochondrial ribosomal protein L28- Family
H [auth H3],
LC [auth D]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
H [auth H3],
LC [auth D]
PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absence of the enzyme pseudouridine synthase (RluD) synthase, there is an accumulation of 50S and 30S subunits and the appearance of abnormal particles (62S and 39S), with concomitant loss of 70S ribosomes [2].
Domain
WB [auth U6]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
VB [auth T6]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
TB [auth R6]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
PB [auth N6]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
OB [auth M6]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
MB [auth K6]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
KB [auth I6]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
HB [auth F6]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth E3]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth E3]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
GB [auth E6]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
GB [auth E6]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
FB [auth D6]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
FB [auth D6]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
FB [auth D6]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
DB [auth B6]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
DB [auth B6]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
FA [auth 53]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
CA [auth 23]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
Z [auth Z3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
X [auth X3]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
V [auth V3]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
V [auth V3]PF00467KOW motif (KOW)KOW motif- Family
T [auth T3]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
R [auth R3]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
R [auth R3]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
P [auth P3]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth O3]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
O [auth O3]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
N [auth N3]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
K [auth K3]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
K [auth K3]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
J [auth J3]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
J [auth J3]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
J [auth J3]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A3],
JC [auth 8]
16S rRNA---
D [auth B3]mt-tRNAVal---
E [auth D3]39S ribosomal protein L2, mitochondrial
G [auth F3]39S ribosomal protein L4, mitochondrial
L [auth L3]39S ribosomal protein L14, mitochondrial
M [auth M3]39S ribosomal protein L15, mitochondrial
Q [auth Q3]39S ribosomal protein L19, mitochondrial
S [auth S3]39S ribosomal protein L21, mitochondrial
U [auth U3]39S ribosomal protein L23, mitochondrial
Y [auth Y3]39S ribosomal protein L47, mitochondrial
AA [auth 03]39S ribosomal protein L32, mitochondrial
BA [auth 13]39S ribosomal protein L33, mitochondrial
DA [auth 33]39S ribosomal protein L35, mitochondrial
EA [auth 43]39S ribosomal protein L36, mitochondrial
GA [auth 63]39S ribosomal protein L38, mitochondrial-
IA [auth 93]39S ribosomal protein L41, mitochondrial
LA [auth c3]39S ribosomal protein L44, mitochondrial
PA [auth g3]39S ribosomal protein L49, mitochondrial
QA [auth h3]39S ribosomal protein L50, mitochondrial-
SA [auth j3]cDNA FLJ76418, highly similar to Homo sapiens mitochondrial ribosomal protein L52 (MRPL52), transcript variant 1, mRNA
UA [auth l3]39S ribosomal protein L54, mitochondrial
VA [auth m3]39S ribosomal protein L55, mitochondrial
WA [auth o3]Ribosomal protein 63, mitochondrial
XA [auth p3]Peptidyl-tRNA hydrolase ICT1, mitochondrial
YA [auth q3]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
BB [auth u3]RNA---
EB [auth C6]28S ribosomal protein S24, mitochondrial
IB [auth G6]28S ribosomal protein S9, mitochondrial
JB [auth H6]28S ribosomal protein S10, mitochondrial-
LB [auth J6]28S ribosomal protein S12, mitochondrial
NB [auth L6]28S ribosomal protein S15, mitochondrial
QB [auth O6]28S ribosomal protein S18b, mitochondrial
RB [auth P6]28S ribosomal protein S18c, mitochondrial
SB [auth Q6]28S ribosomal protein S21, mitochondrial
UB [auth S6]28S ribosomal protein S23, mitochondrial
YB [auth W6]28S ribosomal protein S28, mitochondrial
ZB [auth X6]28S ribosomal protein S29, mitochondrial
BC [auth Z6]28S ribosomal protein S33, mitochondrial
EC [auth c6]Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
GC [auth e6]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
OC [auth B]Unknown protein---
I [auth I3]39S ribosomal protein L10, mitochondrial
NC [auth n]39S ribosomal protein L1, mitochondrial
KC [auth A]39S ribosomal protein L40, mitochondrial
IC [auth 24],
MC [auth FE]
mt-tRNA---
HC [auth A6]12S rRNA---
FC [auth d6]Aurora kinase A-interacting protein-
DC [auth b6]28S ribosomal protein S35, mitochondrial
CC [auth a6]28S ribosomal protein S34, mitochondrial
H [auth H3],
LC [auth D]
39S ribosomal protein L9, mitochondrial
AC [auth Y6]28S ribosomal protein S31, mitochondrial
XB [auth V6]28S ribosomal protein S27, mitochondrial
WB [auth U6]28S ribosomal protein S26, mitochondrial
VB [auth T6]28S ribosomal protein S25, mitochondrial
TB [auth R6]28S ribosomal protein S22, mitochondrial
PB [auth N6]28S ribosomal protein S17, mitochondrial
OB [auth M6]28S ribosomal protein S16, mitochondrial
MB [auth K6]28S ribosomal protein S14, mitochondrial
KB [auth I6]28S ribosomal protein S11, mitochondrial
HB [auth F6]28S ribosomal protein S7, mitochondrial
F [auth E3]39S ribosomal protein L3, mitochondrial
GB [auth E6]28S ribosomal protein S6, mitochondrial
FB [auth D6]28S ribosomal protein S5, mitochondrial
DB [auth B6]28S ribosomal protein S2, mitochondrial
CB [auth A5]Mitochondrial inner membrane protein OXA1L
AB [auth s3]39S ribosomal protein S30, mitochondrial
ZA [auth r3]39S ribosomal protein S18a, mitochondrial
TA [auth k3]39S ribosomal protein L53, mitochondrial-
RA [auth i3]39S ribosomal protein L51, mitochondrial
OA [auth f3]39S ribosomal protein L48, mitochondrial-
NA [auth e3]39S ribosomal protein L46, mitochondrial
MA [auth d3]39S ribosomal protein L45, mitochondrial
KA [auth b3]39S ribosomal protein L43, mitochondrial
JA [auth a3]39S ribosomal protein L42, mitochondrial
HA [auth 73]39S ribosomal protein L39, mitochondrial
FA [auth 53]39S ribosomal protein L37, mitochondrial
CA [auth 23]39S ribosomal protein L34, mitochondrial
Z [auth Z3]39S ribosomal protein L30, mitochondrial
X [auth X3]39S ribosomal protein L28, mitochondrial
W [auth W3]39S ribosomal protein L27, mitochondrial
V [auth V3]39S ribosomal protein L24, mitochondrial
T [auth T3]39S ribosomal protein L22, mitochondrial
B [auth Y2]nascent chain---
R [auth R3]39S ribosomal protein L20, mitochondrial
P [auth P3]Mitochondrial ribosomal protein L18, isoform CRA_b
O [auth O3]39S ribosomal protein L17, mitochondrial
N [auth N3]39S ribosomal protein L16, mitochondrial
K [auth K3]39S ribosomal protein L13, mitochondrial
J [auth J3]39S ribosomal protein L11, mitochondrial
A [auth r1]Elongation factor G, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth D3]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E [auth D3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth D3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth D3]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E [auth D3]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E [auth D3]IPR002171Large ribosomal subunit protein uL2Family
G [auth F3]IPR013005Large ribosomal subunit protein uL4-likeFamily
G [auth F3]IPR002136Large ribosomal subunit protein uL4Family
G [auth F3]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth L3]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L [auth L3]IPR000218Large ribosomal subunit protein uL14Family
M [auth M3]IPR021131Large ribosomal subunit protein uL15/eL18Domain
M [auth M3]IPR030878Large ribosomal subunit protein uL15Family
M [auth M3]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth M3]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
Q [auth Q3]IPR001857Large ribosomal subunit protein bL19Family
Q [auth Q3]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Q [auth Q3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth S3]IPR028909Large ribosomal subunit protein bL21-likeFamily
S [auth S3]IPR001787Large ribosomal subunit protein bL21Family
S [auth S3]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
U [auth U3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth U3]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U [auth U3]IPR013025Large ribosomal subunit protein uL23-likeFamily
Y [auth Y3]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
Y [auth Y3]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
AA [auth 03]IPR002677Large ribosomal subunit protein bL32Family
AA [auth 03]IPR051991Mitochondrial ribosomal protein bL32Family
AA [auth 03]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 13]IPR052008Mitochondrial ribosomal protein bL33Family
BA [auth 13]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 13]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth 13]IPR001705Large ribosomal subunit protein bL33Family
DA [auth 33]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth 33]IPR019338Large ribosomal subunit protein bL35mFamily
DA [auth 33]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth 43]IPR000473Large ribosomal subunit protein bL36Family
EA [auth 43]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
EA [auth 43]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
GA [auth 63]IPR036610PEBP-like superfamilyHomologous Superfamily
GA [auth 63]IPR008914Phosphatidylethanolamine-binding proteinFamily
GA [auth 63]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
IA [auth 93]IPR019189Large ribosomal subunit protein mL41Family
LA [auth c3]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
LA [auth c3]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
LA [auth c3]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
LA [auth c3]IPR014720Double-stranded RNA-binding domainDomain
PA [auth g3]IPR007740Large ribosomal subunit protein mL49Family
QA [auth h3]IPR018305Large ribosomal subunit protein mL50Family
SA [auth j3]IPR034596Large ribosomal subunit protein mL52Family
UA [auth l3]IPR013870Large ribosomal subunit protein mL54Family
VA [auth m3]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
VA [auth m3]IPR018615Large ribosomal subunit protein mL55Family
WA [auth o3]IPR016576Large ribosomal subunit protein mL63Family
XA [auth p3]IPR052104Mitochondrial Release Factor mL62Family
XA [auth p3]IPR000352Peptide chain release factor class IDomain
YA [auth q3]IPR018472Large ribosomal subunit protein mL64Family
YA [auth q3]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
EB [auth C6]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
IB [auth G6]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IB [auth G6]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
IB [auth G6]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IB [auth G6]IPR000754Small ribosomal subunit protein uS9Family
IB [auth G6]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JB [auth H6]IPR027486Small ribosomal subunit protein uS10 domainDomain
JB [auth H6]IPR040055Small ribosomal subunit protein uS10mFamily
JB [auth H6]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
LB [auth J6]IPR006032Small ribosomal subunit protein uS12Family
LB [auth J6]IPR005679Ribosomal protein uS12, bacteriaFamily
LB [auth J6]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NB [auth L6]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
NB [auth L6]IPR000589Small ribosomal subunit protein uS15Family
NB [auth L6]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
NB [auth L6]IPR052137Universal small ribosomal subunit uS15Family
QB [auth O6]IPR040054Small ribosomal subunit protein mS40Family
QB [auth O6]IPR001648Small ribosomal subunit protein bS18Family
QB [auth O6]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
RB [auth P6]IPR001648Small ribosomal subunit protein bS18Family
RB [auth P6]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RB [auth P6]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SB [auth Q6]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
SB [auth Q6]IPR001911Small ribosomal subunit protein bS21Family
UB [auth S6]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
UB [auth S6]IPR023611Small ribosomal subunit protein mS23, conserved domain, metazoaDomain
YB [auth W6]IPR019375Small ribosomal subunit protein bS1mFamily
ZB [auth X6]IPR019368Small ribosomal subunit protein mS29Family
ZB [auth X6]IPR008092Small ribosomal subunit protein mS29, metazoaFamily
ZB [auth X6]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
BC [auth Z6]IPR013219Small ribosomal subunit protein mS33Family
EC [auth c6]IPR010625CHCHDomain
EC [auth c6]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
EC [auth c6]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
GC [auth e6]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
GC [auth e6]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
GC [auth e6]IPR002885Pentatricopeptide repeatRepeat
GC [auth e6]IPR055063Small ribosomal subunit protein mS39, PPRRepeat
I [auth I3]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
I [auth I3]IPR001790Large ribosomal subunit protein uL10Family
I [auth I3]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
NC [auth n]IPR005879Large ribosomal subunit protein uL1, mitochondrialFamily
NC [auth n]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
NC [auth n]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
NC [auth n]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
KC [auth A]IPR019192Large ribosomal subunit protein mL40Family
KC [auth A]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
FC [auth d6]IPR013177Ribosomal protein mS38, C-terminalDomain
DC [auth b6]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
DC [auth b6]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
CC [auth a6]IPR032053Small ribosomal subunit protein mS34Family
H [auth H3],
LC [auth D]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth H3],
LC [auth D]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth H3],
LC [auth D]
IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
H [auth H3],
LC [auth D]
IPR056864Large ribosomal subunit protein bL9m, N-terminal domainDomain
H [auth H3],
LC [auth D]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth H3],
LC [auth D]
IPR000244Large ribosomal subunit protein bL9Family
AC [auth Y6]IPR026299Mitochondrial 28S ribosomal protein S31Family
XB [auth V6]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
XB [auth V6]IPR002885Pentatricopeptide repeatRepeat
XB [auth V6]IPR019266Small ribosomal subunit protein mS27Family
XB [auth V6]IPR034913mS27/PTCD2Family
WB [auth U6]IPR026140Small ribosomal subunit protein mS26Family
VB [auth T6]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
VB [auth T6]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
VB [auth T6]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
TB [auth R6]IPR019374Small ribosomal subunit protein mS22Family
PB [auth N6]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
PB [auth N6]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
PB [auth N6]IPR000266Small ribosomal subunit protein uS17Family
OB [auth M6]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
OB [auth M6]IPR000307Small ribosomal subunit protein bS16Family
MB [auth K6]IPR001209Small ribosomal subunit protein uS14Family
KB [auth I6]IPR001971Small ribosomal subunit protein uS11Family
KB [auth I6]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KB [auth I6]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
HB [auth F6]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
HB [auth F6]IPR000235Small ribosomal subunit protein uS7Family
HB [auth F6]IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth E3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F [auth E3]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
F [auth E3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F [auth E3]IPR000597Large ribosomal subunit protein uL3Family
GB [auth E6]IPR000529Small ribosomal subunit protein bS6Family
GB [auth E6]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
GB [auth E6]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
FB [auth D6]IPR000851Small ribosomal subunit protein uS5Family
FB [auth D6]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
FB [auth D6]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
FB [auth D6]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
FB [auth D6]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth D6]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
FB [auth D6]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DB [auth B6]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
DB [auth B6]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
DB [auth B6]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
DB [auth B6]IPR001865Small ribosomal subunit protein uS2Family
CB [auth A5]IPR001708Membrane insertase YidC/ALB3/OXA1/COX18Family
CB [auth A5]IPR028055Membrane insertase YidC/Oxa/ALB, C-terminalDomain
AB [auth s3]IPR039982Large ribosomal subunit protein mL65Family
AB [auth s3]IPR010793Large ribosomal subunit protein mL37/mL65Family
ZA [auth r3]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth r3]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
TA [auth k3]IPR019716Large ribosomal subunit protein mL53Family
TA [auth k3]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
RA [auth i3]IPR019373Large ribosomal subunit protein mL51Family
OA [auth f3]IPR027486Small ribosomal subunit protein uS10 domainDomain
OA [auth f3]IPR027487Large ribosomal subunit protein mL48Family
OA [auth f3]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
NA [auth e3]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
NA [auth e3]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
NA [auth e3]IPR040008Large ribosomal subunit protein mL46Family
NA [auth e3]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
MA [auth d3]IPR032710NTF2-like domain superfamilyHomologous Superfamily
MA [auth d3]IPR007379Tim44-like domainDomain
MA [auth d3]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
KA [auth b3]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
KA [auth b3]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
KA [auth b3]IPR039927Large ribosomal subunit protein mL43Family
JA [auth a3]IPR019346Large ribosomal subunit protein mL42Family
HA [auth 73]IPR012676TGS-likeHomologous Superfamily
HA [auth 73]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
HA [auth 73]IPR050062Proline-tRNA synthetaseFamily
HA [auth 73]IPR004095TGSDomain
HA [auth 73]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
FA [auth 53]IPR052482Mitochondrial large ribosomal subunit mL37Family
FA [auth 53]IPR010793Large ribosomal subunit protein mL37/mL65Family
CA [auth 23]IPR000271Large ribosomal subunit protein bL34Family
Z [auth Z3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Z [auth Z3]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
Z [auth Z3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth X3]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
X [auth X3]IPR026569Large ribosomal subunit protein bL28Family
X [auth X3]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
W [auth W3]IPR001684Large ribosomal subunit protein bL27Family
V [auth V3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
V [auth V3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth V3]IPR003256Large ribosomal subunit protein uL24Family
V [auth V3]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
V [auth V3]IPR005824KOWDomain
V [auth V3]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
T [auth T3]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T [auth T3]IPR001063Large ribosomal subunit protein uL22Family
T [auth T3]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
R [auth R3]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
R [auth R3]IPR005813Large ribosomal subunit protein bL20Family
P [auth P3]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
P [auth P3]IPR057268Large ribosomal subunit protein uL18Family
P [auth P3]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth O3]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
O [auth O3]IPR000456Large ribosomal subunit protein bL17Family
N [auth N3]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
N [auth N3]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
N [auth N3]IPR016180Large ribosomal subunit protein uL16 domainDomain
N [auth N3]IPR047873Large ribosomal subunit protein uL16Family
K [auth K3]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K [auth K3]IPR005822Large ribosomal subunit protein uL13Family
K [auth K3]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
K [auth K3]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth J3]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
J [auth J3]IPR000911Ribosomal protein uL11Family
J [auth J3]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
J [auth J3]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
J [auth J3]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
J [auth J3]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
A [auth r1]IPR005225Small GTP-binding domainDomain
A [auth r1]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
A [auth r1]IPR004540Translation elongation factor EFG/EF2Family
A [auth r1]IPR000795Translational (tr)-type GTP-binding domainDomain
A [auth r1]IPR000640Elongation factor EFG, domain V-likeDomain
A [auth r1]IPR031157Tr-type G domain, conserved siteConserved Site
A [auth r1]IPR009022Elongation factor G, domain IIIDomain
A [auth r1]IPR035647EF-G domain III/V-likeHomologous Superfamily
A [auth r1]IPR041095Elongation Factor G, domain IIDomain
A [auth r1]IPR004161Translation elongation factor EFTu-like, domain 2Domain
A [auth r1]IPR047872Elongation factor G, domain IVDomain
A [auth r1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
A [auth r1]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A [auth r1]IPR035649EFG, domain VDomain
A [auth r1]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth r1]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth D3]PharosQ5T653
G [auth F3]PharosQ9BYD3
L [auth L3]PharosQ6P1L8
M [auth M3]PharosQ9P015
Q [auth Q3]PharosP49406
U [auth U3]PharosQ16540
Y [auth Y3]PharosQ9HD33
AA [auth 03]PharosQ9BYC8
BA [auth 13]PharosO75394
DA [auth 33]PharosQ9NZE8
EA [auth 43]PharosQ9P0J6
IA [auth 93]PharosQ8IXM3
LA [auth c3]PharosQ9H9J2
PA [auth g3]PharosQ13405
QA [auth h3]PharosQ8N5N7
UA [auth l3]PharosQ6P161
VA [auth m3]PharosQ7Z7F7
WA [auth o3]PharosQ9BQC6
XA [auth p3]PharosQ14197
YA [auth q3]PharosQ8TAE8
IB [auth G6]PharosP82933
JB [auth H6]PharosP82664
LB [auth J6]PharosO15235
NB [auth L6]PharosP82914
QB [auth O6]PharosQ9Y676
RB [auth P6]PharosQ9Y3D5
SB [auth Q6]PharosP82921
UB [auth S6]PharosQ9Y3D9
YB [auth W6]PharosQ9Y2Q9
ZB [auth X6]PharosP51398
BC [auth Z6]PharosQ9Y291
EC [auth c6]PharosQ96BP2
GC [auth e6]PharosQ96EY7
I [auth I3]PharosQ7Z7H8
NC [auth n]PharosQ9BYD6
KC [auth A]PharosQ9NQ50
FC [auth d6]PharosQ9NWT8
DC [auth b6]PharosP82673
CC [auth a6]PharosP82930
H [auth H3],
LC [auth D]
PharosQ9BYD2
AC [auth Y6]PharosQ92665
XB [auth V6]PharosQ92552
VB [auth T6]PharosP82663
TB [auth R6]PharosP82650
PB [auth N6]PharosQ9Y2R5
OB [auth M6]PharosQ9Y3D3
MB [auth K6]PharosO60783
KB [auth I6]PharosP82912
HB [auth F6]PharosQ9Y2R9
F [auth E3]PharosP09001
GB [auth E6]PharosP82932
FB [auth D6]PharosP82675
DB [auth B6]PharosQ9Y399
CB [auth A5]PharosQ15070
AB [auth s3]PharosQ9NP92
ZA [auth r3]PharosQ9NVS2
RA [auth i3]PharosQ4U2R6
OA [auth f3]PharosQ96GC5
MA [auth d3]PharosQ9BRJ2
KA [auth b3]PharosQ8N983
JA [auth a3]PharosQ9Y6G3
HA [auth 73]PharosQ9NYK5
FA [auth 53]PharosQ9BZE1
CA [auth 23]PharosQ9BQ48
Z [auth Z3]PharosQ8TCC3
X [auth X3]PharosQ13084
W [auth W3]PharosQ9P0M9
V [auth V3]PharosQ96A35
R [auth R3]PharosQ9BYC9
O [auth O3]PharosQ9NRX2
N [auth N3]PharosQ9NX20
K [auth K3]PharosQ9BYD1
J [auth J3]PharosQ9Y3B7
A [auth r1]PharosQ96RP9