small conductance mechanosensitive channel YbiO
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | BNR, BNR_2 | e7a46G1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| F | BNR, BNR_2 | e7a46F1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| E | BNR, BNR_2 | e7a46E1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| D | BNR, BNR_2 | e7a46D1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| C | BNR, BNR_2 | e7a46C1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| B | BNR, BNR_2 | e7a46B1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
| A | BNR, BNR_2 | e7a46A1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: BNR, BNR_2 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00924 | Mechanosensitive ion channel, beta-domain (MS_channel_2nd) | Mechanosensitive ion channel, beta-domain | This entry includes small conductance mechanosensitive channels (MscS), which assembles to a homoheptameric complex [1-6]. Each monomer consists of a N-terminal transmembrane region and a large cytoplasmic segment composed of a five-stranded antipara ... | Domain | |
| PF21082 | Mechanosensitive ion channel MscS, C-terminal (MS_channel_3rd) | Mechanosensitive ion channel MscS, C-terminal | This entry includes small conductance mechanosensitive channels (MscS), which assembles to a homoheptameric complex [1-6]. Each monomer consists of a N-terminal transmembrane region and a large cytoplasmic segment composed of a five-stranded antipara ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative transport protein |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR049142 | Mechanosensitive ion channel, transmembrane helices 2/3 | Domain | |
| IPR010920 | LSM domain superfamily | Homologous Superfamily | |
| IPR006685 | Mechanosensitive ion channel MscS | Domain | |
| IPR045276 | Mechanosensitive ion channel YbiO | Family | |
| IPR011014 | Mechanosensitive ion channel MscS, transmembrane-2 | Homologous Superfamily | |
| IPR057485 | Moderate conductance mechanosensitive channel YbiO-like, transmembrane helix 1 | Domain | |
| IPR049278 | Mechanosensitive ion channel MscS, C-terminal domain | Domain | |
| IPR011066 | Mechanosensitive ion channel MscS, C-terminal domain superfamily | Homologous Superfamily | |
| IPR023408 | Mechanosensitive ion channel MscS, beta-domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Small conductance mechanosensitive ion channel (MscS) | Small conductance mechanosensitive ion channels |














