6Z1P | pdb_00006z1p

Structure of the mitochondrial ribosome from Tetrahymena thermophila

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
P [auth Ap]	SCOP2 Family	Ribosomal protein L14	8100379	4001826	SCOP2 (2022-06-29)
P [auth Ap]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8100380	3000433	SCOP2 (2022-06-29)
HB [auth Bl]	SCOP2 Family	Cold shock DNA-binding domain-like	8100381	4001909	SCOP2 (2022-06-29)
HB [auth Bl]	SCOP2 Superfamily	Nucleic acid-binding proteins	8100382	3000135	SCOP2 (2022-06-29)
GA [auth AG]	SCOP2 Family	Ribosomal protein L36	8094175	4003715	SCOP2 (2022-06-29)
GA [auth AG]	SCOP2 Superfamily	Ribosomal protein L36	8094176	3001346	SCOP2 (2022-06-29)
EA [auth AE]	SCOP2 Family	Ribosomal protein L33p	8095304	4000511	SCOP2 (2022-06-29)
EA [auth AE]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8095305	3001320	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth Ad]		e6z1pAd01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
L [auth Al]	RGM_N	e6z1pAl1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
N [auth An]	RGM_N	e6z1pAn1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
P [auth Ap]	RGM_N	e6z1pAp1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
Y [auth Ay]	Arf, G-alpha	e6z1pAy1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
JA [auth AJ]		e6z1pAJ01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
CB [auth Bg]		e6z1pBg01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
HB [auth Bl]	RGM_N	e6z1pBl1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
UB [auth By]	Med8	e6z1pBy1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Med8	ECOD (v294.1)
GC [auth BK]	RGM_N	e6z1pBK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
NC [auth BR]		e6z1pBR01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
HC [auth BL]		e6z1pBL01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
ZB [auth BD]	PK_Tyr_Ser-Thr	e6z1pBD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
G [auth Ag]	RGM_N	e6z1pAg1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
OB [auth Bs]	RGM_N	e6z1pBs1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
MB [auth Bq]		e6z1pBq01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
KB [auth Bo]	Arf, G-alpha	e6z1pBo1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Arf, G-alpha	ECOD (v294.1)
E [auth Ae]		e6z1pAe01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
VA [auth AV]		e6z1pAV01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
LA [auth AL]	RGM_N	e6z1pAL1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
GA [auth AG]	RGM_N	e6z1pAG1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
EA [auth AE]	RGM_N	e6z1pAE1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
C [auth Ac]	RGM_N	e6z1pAc1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
X [auth Ax]		e6z1pAx01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
V [auth Av]		e6z1pAv01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
U [auth Au]		e6z1pAu01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
S [auth As]		e6z1pAs01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)
R [auth Ar]	RGM_N	e6z1pAr1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: RGM_N	ECOD (v294.1)
Q [auth Aq]		e6z1pAq01	A: a/b three-layered sandwiches	X: Rossmann-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F:	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
CA [auth AC]	PF06984	Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)	Mitochondrial 39-S ribosomal protein L47 (MRP-L47)	-	Family
FA [auth AF]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
JA [auth AJ]	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
NA [auth AN]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
NA [auth AN]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
OA [auth AO]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
SA [auth AS]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
TA [auth AT]	PF02978	Signal peptide binding domain (SRP_SPB)	Signal peptide binding domain		Domain
UA [auth AU]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
CC [auth BG]	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain
EC [auth BI]	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
EC [auth BI]	PF16113	Enoyl-CoA hydratase/isomerase (ECH_2)	Enoyl-CoA hydratase/isomerase	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's ...	This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's C-terminus.	Domain
LC [auth BP]	PF00886	Ribosomal protein S16 (Ribosomal_S16)	Ribosomal protein S16	-	Family
UC [auth BY]	PF02536	mTERF (mTERF)	mTERF	-	Family
NC [auth BR]	PF01491	Frataxin-like domain (Frataxin_Cyay)	Frataxin-like domain	This family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is currently unkno ...	This family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is currently unknown. It has been suggested that this family is involved in iron transport.	Domain
MC [auth BQ]	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
HC [auth BL]	PF01641	SelR domain (SelR)	SelR domain	Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and h ...	Methionine sulfoxide reduction is an important process, by which cells regulate biological processes and cope with oxidative stress. MsrA, a protein involved in the reduction of methionine sulfoxides in proteins, has been known for four decades and has been extensively characterised with respect to structure and function. However, recent studies revealed that MsrA is only specific for methionine-S-sulfoxides. Because oxidised methionines occur in a mixture of R and S isomers in vivo, it was unclear how stereo-specific MsrA could be responsible for the reduction of all protein methionine sulfoxides. It appears that a second methionine sulfoxide reductase, SelR, evolved that is specific for methionine-R-sulfoxides, the activity that is different but complementary to that of MsrA. Thus, these proteins, working together, could reduce both stereoisomers of methionine sulfoxide. This domain is found both in SelR proteins and fused with the peptide methionine sulfoxide reductase enzymatic domain Pfam:PF01625. The domain has two conserved cysteines and histidines. The domain binds both selenium and zinc [2]. The final cysteine is found to be replaced by the rare amino acid selenocysteine in some members of the family [1]. This family has methionine-R-sulfoxide reductase activity [2].	Domain
ZB [auth BD]	PF09597	Small ribosomal subunit protein mS41 SAM domain (SAM_Ribosomal_mS41)	Small ribosomal subunit protein mS41 SAM domain	This entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome ...	This entry represents a SAM-like domain found in fungal mitoribosome protein mS41. The mitochondrion-specific ribosomal protein mS41 family comprises proteins that are integral components of the mitochondrial ribosome, also known as the mitoribosome. These proteins play a crucial role in the dedicated translation machinery that synthesizes mitochondrial genome-encoded proteins, which include essential transmembrane subunits of the mitochondrial respiratory chain. The mitoribosomes are tethered to the mitochondrial inner membrane, ensuring that translation products are cotranslationally integrated into the membrane. Additionally, members of the mS41 family are implicated in the regulation of telomere length, a process essential for maintaining chromosome stability and cellular lifespan. Certain members are also required for survival upon exposure to specific environmental stressors, such as the K1 killer toxin.	Domain
WB [auth BA]	PF10213	Mitochondrial ribosomal subunit protein (MRP-S28)	Mitochondrial ribosomal subunit protein	-	Family
VA [auth AV]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
VA [auth AV]	PF09360	Iron-binding zinc finger CDGSH type (zf-CDGSH)	Iron-binding zinc finger CDGSH type	The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family [1]. The domain is oriented towards the cytopl ...	The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family [1]. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, Pfam:PF10660 [2]. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm [3].	Domain
LA [auth AL]	PF05046	Mitochondrial large subunit ribosomal protein (Img2) (Img2)	Mitochondrial large subunit ribosomal protein (Img2)	This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].	Domain
LA [auth AL]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain
GA [auth AG]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36		Domain
EA [auth AE]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
BA [auth AB]	PF00830	Ribosomal L28 family (Ribosomal_L28)	Ribosomal L28 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth Ab]	LSU rRNA_2	-	-	-
D [auth Ad]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
F [auth Af]	Ymf69	-	-	-
H [auth Ah]	bL7/L12m	-	-	-
I [auth Ai]	bL7/12m	-	-	-
L [auth Al]	Ribosomal protein L9, amine-terminal domain protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
M [auth Am]	Ymf74	-	-	-
N [auth An]	Ribosomal protein L11, amine-terminal domain protein	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
O [auth Ao]	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
P [auth Ap]	Ribosomal protein L14	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
T [auth At]	bL19m	-	-	-
Y [auth Ay]	50S ribosomal protein L24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
Z [auth Az]	bL25m	-	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	-
AA	50S ribosomal protein L27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
CA [auth AC]	39-S ribosomal protein L47	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
DA [auth AD]	bL32m	-	-	-
FA [auth AF]	bL35m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
JA [auth AJ]	Ribosomal protein L51/S25/CI-B8 domain protein	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
KA [auth AK]	mL46	-	-	-
MA [auth AM]	mL53	-	-	-
NA [auth AN]	mL54	-	-	-
OA [auth AO]	mL64	-	-	-
RA [auth AR]	mL103	-	-	-
SA [auth AS]	mL104	-	-	-
TA [auth AT]	Signal peptide-binding domain protein	RNA binding 7S RNA binding binding nucleic acid binding	establishment of protein localization cellular localization establishment of protein localization to membrane protein targeting localization within membrane establishment of localization protein targeting to membrane localization SRP-dependent cotranslational protein targeting to membrane establishment of protein localization to organelle cotranslational protein targeting to membrane cellular process establishment of protein localization to endoplasmic reticulum protein targeting to ER	signal recognition particle protein-containing complex cellular anatomical structure intracellular anatomical structure ribonucleoprotein complex cytoplasm
UA [auth AU]	mL106	-	-	-
WA [auth Ba]	SSU rRNA_1	-	-	-
XA [auth Bb]	SSU rRNA_2	-	-	-
ZA [auth Bd]	Ymf64	-	-	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
AB [auth Be]	Ymf76	-	-	-
BB [auth Bf]	30S ribosomal protein S5	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
CB [auth Bg]	Ribosomal protein S6	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
DB [auth Bh]	Ymf63	-	-	-
FB [auth Bj]	Ymf59	-	-	-
HB [auth Bl]	Ribosomal protein S12	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
JB [auth Bn]	Ribosomal protein S14	-	-	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
LB [auth Bp]	30S ribosomal protein S16	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome
NB [auth Br]	Ribosomal protein S18	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
PB [auth Bt]	bS21m	-	-	-
QB [auth Bu]	mS23	-	-	-
SB [auth Bw]	Ribosomal death-associated protein	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
TB [auth Bx]	mS31	-	-	-
UB [auth By]	mS33	-	-	-
VB [auth Bz]	mS34	-	-	-
XB [auth BB]	mS37	-	-	-
YB [auth BC]	mS38	-	-	-
BC [auth BF]	mS75	-	-	-
CC [auth BG]	mS76	-	-	-
EC [auth BI]	Enoyl-CoA hydratase/isomerase	hydrolase activity, acting on ester bonds 3-hydroxyisobutyryl-CoA hydrolase activity thiolester hydrolase activity deacylase activity short-chain fatty acyl-CoA hydrolase activity hydrolase activity fatty acyl-CoA hydrolase activity catalytic activity acyl-CoA hydrolase activity	catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process branched-chain amino acid catabolic process carboxylic acid catabolic process small molecule metabolic process branched-chain amino acid metabolic process amino acid catabolic process L-amino acid catabolic process carboxylic acid metabolic process primary metabolic process catabolic process oxoacid metabolic process amino acid metabolic process organic acid catabolic process organic acid metabolic process alpha-amino acid metabolic process branched-chain amino acid catabolic process carboxylic acid catabolic process small molecule metabolic process branched-chain amino acid metabolic process amino acid catabolic process L-amino acid catabolic process carboxylic acid metabolic process primary metabolic process L-amino acid metabolic process proteinogenic amino acid metabolic process alpha-amino acid catabolic process proteinogenic amino acid catabolic process metabolic process cellular process L-valine catabolic process small molecule catabolic process valine metabolic process	-
FC [auth BJ]	mS78	-	-	-
GC [auth BK]	mS79	-	-	-
IC [auth BM]	mS81	-	-	-
JC [auth BN]	mS82	-	-	-
KC [auth BO]	PARP alpha-helical domain-containing protein,mS83	pentosyltransferase activity NAD+ poly-ADP-ribosyltransferase activity glycosyltransferase activity transferase activity catalytic activity	-	-
LC [auth BP]	mS84,mS84	-	-	-
OC [auth BS]	mS87	-	-	-
QC [auth BU]	mS89	-	-	-
RC [auth BV]	mS90	-	-	-
SC [auth BW]	mS91	-	-	-
TC [auth BX]	Ribosomal protein S3	-	-	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
UC [auth BY]	mS93	binding nucleic acid binding	-	-
PC [auth BT]	mS88	-	-	-
NC [auth BR]	Iron donor protein CyaY	metallochaperone activity iron chaperone activity molecular carrier activity cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding metal cluster binding metallochaperone activity iron chaperone activity molecular carrier activity cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding metal cluster binding ferric iron binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport cellular component biogenesis cellular component organization metallo-sulfur cluster assembly cellular component assembly iron-sulfur cluster assembly cellular process cellular component organization or biogenesis	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
MC [auth BQ]	mS85	binding nucleic acid binding	-	-
HC [auth BL]	SelR domain protein	oxidoreductase activity, acting on a sulfur group of donors oxidoreductase activity oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor catalytic activity, acting on a protein catalytic activity peptide-methionine (R)-S-oxide reductase activity	response to oxidative stress response to stimulus response to stress protein repair metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm
DC [auth BH]	mS77	-	-	-
AC [auth BE]	mS45	-	-	-
ZB [auth BD]	IGR motif protein	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
WB [auth BA]	Ribosomal subunit protein	-	-	-
RB [auth Bv]	mS26	-	-	-
G [auth Ag]	Ymf60	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
OB [auth Bs]	Ribosomal protein S19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
MB [auth Bq]	30S ribosomal protein S17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
KB [auth Bo]	30S ribosomal protein S15	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
IB [auth Bm]	Ribosomal protein S13	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
GB [auth Bk]	Ymf61	-	-	-
EB [auth Bi]	Ribosomal protein S9	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
YA [auth Bc]	Ymf73	-	-	-
E [auth Ae]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
VA [auth AV]	Iron-binding zinc finger CDGSH type protein	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
QA [auth AQ]	mL102	-	-	-
PA [auth AP]	mL101	-	-	-
LA [auth AL]	Large subunit ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
IA [auth AI]	Ribosomal protein L27	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
HA [auth AH]	mL40	-	-	-
GA [auth AG]	Ribosomal protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
EA [auth AE]	50S ribosomal protein L33	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm protein-containing complex intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
C [auth Ac]	Ribosomal protein L2	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
BA [auth AB]	Ribosomal protein L28	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
X [auth Ax]	Ribosomal protein L23, putative	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
W [auth Aw]	Ribosomal protein L22/L17e	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
V [auth Av]	50S ribosomal protein L21	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
U [auth Au]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
S [auth As]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
R [auth Ar]	Ribosomal protein L16	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Q [auth Aq]	Ribosomal protein L15, putative	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
K [auth Ak]	Ribosomal protein L7/L12 carboxy-terminal domain protein	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
J [auth Aj]	bL7/12m	-	-	-
A [auth Aa]	LSU rRNA_1	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth Ad]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
D [auth Ad]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
D [auth Ad]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
D [auth Ad]	IPR000597	Large ribosomal subunit protein uL3	Family
L [auth Al]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
L [auth Al]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
L [auth Al]	IPR036791	Large ribosomal subunit protein bL9, C-terminal domain superfamily	Homologous Superfamily
L [auth Al]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
L [auth Al]	IPR000244	Large ribosomal subunit protein bL9	Family
N [auth An]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
N [auth An]	IPR000911	Ribosomal protein uL11	Family
N [auth An]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
N [auth An]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
N [auth An]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
O [auth Ao]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
O [auth Ao]	IPR005822	Large ribosomal subunit protein uL13	Family
O [auth Ao]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
O [auth Ao]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
P [auth Ap]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
P [auth Ap]	IPR000218	Large ribosomal subunit protein uL14	Family
T [auth At]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
T [auth At]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Y [auth Ay]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
Y [auth Ay]	IPR003256	Large ribosomal subunit protein uL24	Family
Y [auth Ay]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
Y [auth Ay]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
Y [auth Ay]	IPR005824	KOW	Domain
Y [auth Ay]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Z [auth Az]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
AA	IPR001684	Large ribosomal subunit protein bL27	Family
CA [auth AC]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
CA [auth AC]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
CA [auth AC]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
FA [auth AF]	IPR021137	Large ribosomal subunit protein bL35-like	Family
FA [auth AF]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
JA [auth AJ]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
JA [auth AJ]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
JA [auth AJ]	IPR039927	Large ribosomal subunit protein mL43	Family
NA [auth AN]	IPR013870	Large ribosomal subunit protein mL54	Family
TA [auth AT]	IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	Homologous Superfamily
TA [auth AT]	IPR004125	Signal recognition particle, SRP54 subunit, M-domain	Domain
ZA [auth Bd]	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
BB [auth Bf]	IPR000851	Small ribosomal subunit protein uS5	Family
BB [auth Bf]	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
BB [auth Bf]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
CB [auth Bg]	IPR000529	Small ribosomal subunit protein bS6	Family
CB [auth Bg]	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
CB [auth Bg]	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily
HB [auth Bl]	IPR006032	Small ribosomal subunit protein uS12	Family
HB [auth Bl]	IPR005679	Ribosomal protein uS12, bacteria	Family
HB [auth Bl]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
LB [auth Bp]	IPR023803	Small ribosomal subunit protein bS16 domain superfamily	Homologous Superfamily
LB [auth Bp]	IPR000307	Small ribosomal subunit protein bS16	Family
NB [auth Br]	IPR001648	Small ribosomal subunit protein bS18	Family
NB [auth Br]	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
SB [auth Bw]	IPR019368	Small ribosomal subunit protein mS29	Family
EC [auth BI]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
EC [auth BI]	IPR032259	Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type	Family
EC [auth BI]	IPR045004	Enoyl-CoA hydratase/isomerase domain	Domain
GC [auth BK]	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily
KC [auth BO]	IPR004102	Poly(ADP-ribose) polymerase, regulatory domain	Domain
UC [auth BY]	IPR003690	Transcription termination factor, mitochondrial/chloroplastic	Family
UC [auth BY]	IPR038538	MTERF superfamily, mitochondrial/chloroplastic	Homologous Superfamily
NC [auth BR]	IPR002908	Frataxin/CyaY	Family
NC [auth BR]	IPR020895	Frataxin conserved site	Conserved Site
NC [auth BR]	IPR036524	Frataxin/CyaY superfamily	Homologous Superfamily
MC [auth BQ]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
HC [auth BL]	IPR028427	Peptide methionine sulfoxide reductase MsrB	Family
HC [auth BL]	IPR011057	Mss4-like superfamily	Homologous Superfamily
HC [auth BL]	IPR002579	Peptide methionine sulphoxide reductase MrsB domain	Domain
ZB [auth BD]	IPR019083	Small ribosomal subunit protein mS41, SAM domain	Domain
ZB [auth BD]	IPR039603	Small ribosomal subunit protein mS41	Family
WB [auth BA]	IPR019349	Small ribosomal subunit protein mS35, mitochondrial, conserved domain	Domain
G [auth Ag]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
OB [auth Bs]	IPR002222	Small ribosomal subunit protein uS19	Family
OB [auth Bs]	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
MB [auth Bq]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
MB [auth Bq]	IPR000266	Small ribosomal subunit protein uS17	Family
KB [auth Bo]	IPR005290	Small ribosomal subunit protein uS15, bacteria	Family
KB [auth Bo]	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
KB [auth Bo]	IPR000589	Small ribosomal subunit protein uS15	Family
IB [auth Bm]	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
IB [auth Bm]	IPR001892	Small ribosomal subunit protein uS13	Family
IB [auth Bm]	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
IB [auth Bm]	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
EB [auth Bi]	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
EB [auth Bi]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
EB [auth Bi]	IPR000754	Small ribosomal subunit protein uS9	Family
EB [auth Bi]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
E [auth Ae]	IPR013005	Large ribosomal subunit protein uL4-like	Family
E [auth Ae]	IPR002136	Large ribosomal subunit protein uL4	Family
E [auth Ae]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
VA [auth AV]	IPR018967	Iron-binding zinc finger, CDGSH type	Domain
VA [auth AV]	IPR042216	MitoNEET, CDGSH iron-sulfur domain	Homologous Superfamily
VA [auth AV]	IPR052950	CDGSH iron-sulfur domain-containing protein	Family
LA [auth AL]	IPR007740	Large ribosomal subunit protein mL49	Family
IA [auth AI]	IPR019189	Large ribosomal subunit protein mL41	Family
GA [auth AG]	IPR000473	Large ribosomal subunit protein bL36	Family
GA [auth AG]	IPR052010	Ribosomal Large Subunit bL36	Family
GA [auth AG]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
EA [auth AE]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
EA [auth AE]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
EA [auth AE]	IPR001705	Large ribosomal subunit protein bL33	Family
C [auth Ac]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
C [auth Ac]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
C [auth Ac]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
C [auth Ac]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
C [auth Ac]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
C [auth Ac]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
C [auth Ac]	IPR002171	Large ribosomal subunit protein uL2	Family
BA [auth AB]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
BA [auth AB]	IPR026569	Large ribosomal subunit protein bL28	Family
BA [auth AB]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
X [auth Ax]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
X [auth Ax]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
X [auth Ax]	IPR013025	Large ribosomal subunit protein uL23-like	Family
W [auth Aw]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
W [auth Aw]	IPR001063	Large ribosomal subunit protein uL22	Family
W [auth Aw]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
V [auth Av]	IPR028909	Large ribosomal subunit protein bL21-like	Family
V [auth Av]	IPR001787	Large ribosomal subunit protein bL21	Family
V [auth Av]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
U [auth Au]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
U [auth Au]	IPR005813	Large ribosomal subunit protein bL20	Family
S [auth As]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
S [auth As]	IPR000456	Large ribosomal subunit protein bL17	Family
R [auth Ar]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
R [auth Ar]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
R [auth Ar]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
R [auth Ar]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
R [auth Ar]	IPR047873	Large ribosomal subunit protein uL16	Family
Q [auth Aq]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
Q [auth Aq]	IPR030878	Large ribosomal subunit protein uL15	Family
Q [auth Aq]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
Q [auth Aq]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
K [auth Ak]	IPR013823	Large ribosomal subunit protein bL12, C-terminal	Domain
K [auth Ak]	IPR014719	Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like	Homologous Superfamily
K [auth Ak]	IPR000206	Large ribosomal subunit protein bL12	Family