6Z1P

Structure of the mitochondrial ribosome from Tetrahymena thermophila


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
P [auth Ap]SCOP2 FamilyRibosomal protein L148100379 4001826 SCOP2 (2022-06-29)
P [auth Ap]SCOP2 Superfamily50S Ribosomal protein L14-like8100380 3000433 SCOP2 (2022-06-29)
EA [auth AE]SCOP2 FamilyRibosomal protein L33p8095304 4000511 SCOP2 (2022-06-29)
EA [auth AE]SCOP2 SuperfamilyZn-binding ribosomal proteins8095305 3001320 SCOP2 (2022-06-29)
HB [auth Bl]SCOP2 FamilyCold shock DNA-binding domain-like8100381 4001909 SCOP2 (2022-06-29)
HB [auth Bl]SCOP2 SuperfamilyNucleic acid-binding proteins8100382 3000135 SCOP2 (2022-06-29)
GA [auth AG]SCOP2 FamilyRibosomal protein L368094175 4003715 SCOP2 (2022-06-29)
GA [auth AG]SCOP2 SuperfamilyRibosomal protein L368094176 3001346 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth Ag]Ribosomal_L6_1e6z1pAg1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
G [auth Ag]UNK_F_TYPEe6z1pAg2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: UNK_F_TYPEECOD (1.6)
L [auth Al]Ribosomal_L9_N_1e6z1pAl1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
P [auth Ap]Ribosomal_L14e6z1pAp1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
EA [auth AE]Ribosomal_L33e6z1pAE1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
LA [auth AL]Img2e6z1pAL1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
OA [auth AO]UNK_F_TYPEe6z1pAO1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: UNK_F_TYPEECOD (1.6)
HB [auth Bl]Ribosom_S12_S23e6z1pBl1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
OB [auth Bs]Ribosomal_S19e6z1pBs1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
UB [auth By]F_UNCLASSIFIEDe6z1pBy1 A: extended segmentsX: Mitoribosomal protein mS33 (From Topology)H: Mitoribosomal protein mS33 (From Topology)T: Mitoribosomal protein mS33F: F_UNCLASSIFIEDECOD (1.6)
GC [auth BK]Lipase_2_1e6z1pBK1 A: a/b three-layered sandwichesX: alpha/beta-Hydrolases (From Topology)H: alpha/beta-Hydrolases (From Topology)T: alpha/beta-HydrolasesF: Lipase_2_1ECOD (1.6)
N [auth An]Ribosomal_L11e6z1pAn1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
N [auth An]Ribosomal_L11_Ne6z1pAn2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
R [auth Ar]Ribosomal_L16e6z1pAr1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
Y [auth Ay]ribosomal_L24_1e6z1pAy1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
C [auth Ac]Ribosomal_L2e6z1pAc2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
C [auth Ac]Ribosomal_L2_C_1e6z1pAc1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_1ECOD (1.6)
GA [auth AG]Ribosomal_L36e6z1pAG1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
JB [auth Bn]UNK_F_TYPEe6z1pBn1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: UNK_F_TYPEECOD (1.6)
KB [auth Bo]Ribosomal_S15_1e6z1pBo1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
ZB [auth BD]F_UNCLASSIFIEDe6z1pBD1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth Ad]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth Ae]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth Al]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
P [auth Ap]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Q [auth Aq]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
X [auth Ax]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
EA [auth AE]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
FA [auth AF]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IA [auth AI]PF09809Mitochondrial ribosomal protein L27 (MRP-L27)Mitochondrial ribosomal protein L27- Family
JA [auth AJ]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
LA [auth AL]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1].Domain
CB [auth Bg]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
EB [auth Bi]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
HB [auth Bl]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
LB [auth Bp]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
OB [auth Bs]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
SB [auth Bw]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
WB [auth BA]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
EC [auth BI]PF16113Enoyl-CoA hydratase/isomerase (ECH_2)Enoyl-CoA hydratase/isomeraseThis family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's ...This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from Pfam:PF00378 in the structure of it's C-terminus.
Domain
HC [auth BL]PF01641SelR domain (SelR)SelR domain- Family
NC [auth BR]PF01491Frataxin-like domain (Frataxin_Cyay)Frataxin-like domainThis family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is current ...This family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is currently unknown. It has been suggested that this family is involved in iron transport.
Domain
UC [auth BY]PF02536mTERF (mTERF)mTERF- Family
N [auth An]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
N [auth An]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
O [auth Ao]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth Ar]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
S [auth As]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
U [auth Au]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
V [auth Av]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
W [auth Aw]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
Y [auth Ay]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
Y [auth Ay]PF00467KOW motif (KOW)KOW motif- Family
BA [auth AB]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
CA [auth AC]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
C [auth Ac]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
GA [auth AG]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
NA [auth AN]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
TA [auth AT]PF02978Signal peptide binding domain (SRP_SPB)Signal peptide binding domain- Domain
VA [auth AV]PF09360Iron-binding zinc finger CDGSH type (zf-CDGSH)Iron-binding zinc finger CDGSH typeThe CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family [1]. The domain is oriented towards the cytopl ...The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family [1]. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, Pfam:PF10660 [2]. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm [3].
Domain
BB [auth Bf]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
IB [auth Bm]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
KB [auth Bo]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
MB [auth Bq]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
NB [auth Br]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
ZB [auth BD]PF09597IGR protein motif (IGR)IGR protein motifThis domain is found in fungal proteins and contains a conserved IGR motif. Its function is unknown.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth Aa]LSU rRNA_1---
D [auth Ad]50S ribosomal protein L3
E [auth Ae]50S ribosomal protein L4
G [auth Ag]Ymf60
I [auth Ai]bL7/12m---
J [auth Aj]bL7/12m---
K [auth Ak]Ribosomal protein L7/L12 carboxy-terminal domain protein
L [auth Al]Ribosomal protein L9, amine-terminal domain protein
M [auth Am]Ymf74- -
P [auth Ap]Ribosomal protein L14
Q [auth Aq]Ribosomal protein L15, putative
T [auth At]bL19m- - -
X [auth Ax]Ribosomal protein L23, putative
Z [auth Az]bL25m- -
50S ribosomal protein L27
DA [auth AD]bL32m---
EA [auth AE]50S ribosomal protein L33
FA [auth AF]bL35m
HA [auth AH]mL40- - -
IA [auth AI]Ribosomal protein L27 -
JA [auth AJ]Ribosomal protein L51/S25/CI-B8 domain protein
LA [auth AL]Large subunit ribosomal protein
OA [auth AO]mL64- - -
QA [auth AQ]mL102- - -
WA [auth Ba]SSU rRNA_1---
XA [auth Bb]SSU rRNA_2---
ZA [auth Bd]Ymf64- -
CB [auth Bg]Ribosomal protein S6
DB [auth Bh]Ymf63- -
EB [auth Bi]Ribosomal protein S9
GB [auth Bk]Ymf61- -
HB [auth Bl]Ribosomal protein S12
LB [auth Bp]30S ribosomal protein S16
OB [auth Bs]Ribosomal protein S19
QB [auth Bu]mS23- - -
SB [auth Bw]Ribosomal death-associated protein- -
TB [auth Bx]mS31- - -
UB [auth By]mS33- - -
VB [auth Bz]mS34- - -
WB [auth BA]Ribosomal subunit protein- - -
YB [auth BC]mS38---
AC [auth BE]mS45- - -
CC [auth BG]mS76- - -
DC [auth BH]mS77---
EC [auth BI]Enoyl-CoA hydratase/isomerase - -
FC [auth BJ]mS78- - -
GC [auth BK]mS79- - -
HC [auth BL]SelR domain protein -
LC [auth BP]mS84,mS84---
NC [auth BR]Iron donor protein CyaY
OC [auth BS]mS87- - -
PC [auth BT]mS88---
QC [auth BU]mS89- - -
SC [auth BW]mS91---
TC [auth BX]Ribosomal protein S3- -
UC [auth BY]mS93 -
N [auth An]Ribosomal protein L11, amine-terminal domain protein
O [auth Ao]50S ribosomal protein L13
R [auth Ar]Ribosomal protein L16
S [auth As]50S ribosomal protein L17
B [auth Ab]LSU rRNA_2---
U [auth Au]50S ribosomal protein L20
V [auth Av]50S ribosomal protein L21
W [auth Aw]Ribosomal protein L22/L17e
Y [auth Ay]50S ribosomal protein L24
BA [auth AB]Ribosomal protein L28 -
CA [auth AC]39-S ribosomal protein L47
C [auth Ac]Ribosomal protein L2
GA [auth AG]Ribosomal protein
KA [auth AK]mL46- - -
MA [auth AM]mL53- - -
NA [auth AN]mL54- - -
PA [auth AP]mL101- - -
RA [auth AR]mL103- - -
SA [auth AS]mL104- - -
TA [auth AT]Signal peptide-binding domain protein
UA [auth AU]mL106- - -
VA [auth AV]Iron-binding zinc finger CDGSH type protein -
YA [auth Bc]Ymf73- -
AB [auth Be]Ymf76- -
BB [auth Bf]30S ribosomal protein S5
FB [auth Bj]Ymf59- -
F [auth Af]Ymf69- -
IB [auth Bm]Ribosomal protein S13
JB [auth Bn]Ribosomal protein S14- -
KB [auth Bo]30S ribosomal protein S15
MB [auth Bq]30S ribosomal protein S17
NB [auth Br]Ribosomal protein S18
PB [auth Bt]bS21m- - -
RB [auth Bv]mS26- - -
XB [auth BB]mS37- - -
ZB [auth BD]IGR motif protein- -
H [auth Ah]bL7/L12m---
BC [auth BF]mS75---
IC [auth BM]mS81- - -
JC [auth BN]mS82- - -
KC [auth BO]PARP alpha-helical domain-containing protein,mS83 - -
MC [auth BQ]mS85 - -
RC [auth BV]mS90- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
D [auth Ad]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth Ad]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth Ad]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth Ad]IPR000597Large ribosomal subunit protein uL3Family
E [auth Ae]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth Ae]IPR002136Large ribosomal subunit protein uL4Family
E [auth Ae]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
G [auth Ag]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth Ak]IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
K [auth Ak]IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
K [auth Ak]IPR000206Large ribosomal subunit protein bL12Family
L [auth Al]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
L [auth Al]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
L [auth Al]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
L [auth Al]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
L [auth Al]IPR000244Large ribosomal subunit protein bL9Family
P [auth Ap]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
P [auth Ap]IPR000218Large ribosomal subunit protein uL14Family
Q [auth Aq]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
Q [auth Aq]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Q [auth Aq]IPR030878Large ribosomal subunit protein uL15Family
Q [auth Aq]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth At]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
T [auth At]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Ax]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
X [auth Ax]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
X [auth Ax]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth Az]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
IPR001684Large ribosomal subunit protein bL27Family
EA [auth AE]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth AE]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
EA [auth AE]IPR001705Large ribosomal subunit protein bL33Family
FA [auth AF]IPR021137Large ribosomal subunit protein bL35-likeFamily
FA [auth AF]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IA [auth AI]IPR019189Large ribosomal subunit protein mL41Family
JA [auth AJ]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth AJ]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth AJ]IPR039927Large ribosomal subunit protein mL43Family
LA [auth AL]IPR007740Large ribosomal subunit protein mL49Family
ZA [auth Bd]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CB [auth Bg]IPR000529Small ribosomal subunit protein bS6Family
CB [auth Bg]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
CB [auth Bg]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
EB [auth Bi]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
EB [auth Bi]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EB [auth Bi]IPR000754Small ribosomal subunit protein uS9Family
EB [auth Bi]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
HB [auth Bl]IPR006032Small ribosomal subunit protein uS12Family
HB [auth Bl]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
HB [auth Bl]IPR005679Ribosomal protein uS12, bacterial-typeFamily
LB [auth Bp]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
LB [auth Bp]IPR000307Small ribosomal subunit protein bS16Family
OB [auth Bs]IPR002222Small ribosomal subunit protein uS19Family
OB [auth Bs]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
SB [auth Bw]IPR019368Small ribosomal subunit protein mS29Family
WB [auth BA]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
EC [auth BI]IPR029045ClpP/crotonase-like domain superfamilyHomologous Superfamily
EC [auth BI]IPR032259Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H typeFamily
EC [auth BI]IPR045004Enoyl-CoA hydratase/isomerase domainDomain
GC [auth BK]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
HC [auth BL]IPR028427Peptide methionine sulfoxide reductase MsrBFamily
HC [auth BL]IPR011057Mss4-like superfamilyHomologous Superfamily
HC [auth BL]IPR002579Peptide methionine sulphoxide reductase MrsB domainDomain
NC [auth BR]IPR002908Frataxin/CyaYFamily
NC [auth BR]IPR020895Frataxin conserved siteConserved Site
NC [auth BR]IPR036524Frataxin/CyaY superfamilyHomologous Superfamily
UC [auth BY]IPR003690Transcription termination factor, mitochondrial/chloroplasticFamily
UC [auth BY]IPR038538MTERF superfamily, mitochondrial/chloroplasticHomologous Superfamily
N [auth An]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
N [auth An]IPR000911Ribosomal protein uL11Family
N [auth An]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
N [auth An]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
N [auth An]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
O [auth Ao]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
O [auth Ao]IPR005822Large ribosomal subunit protein uL13Family
O [auth Ao]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
O [auth Ao]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
R [auth Ar]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
R [auth Ar]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
R [auth Ar]IPR016180Large ribosomal subunit protein uL16 domainDomain
R [auth Ar]IPR047873Large ribosomal subunit protein uL16Family
S [auth As]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
S [auth As]IPR000456Large ribosomal subunit protein bL17Family
U [auth Au]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
U [auth Au]IPR005813Large ribosomal subunit protein bL20Family
V [auth Av]IPR028909Large ribosomal subunit protein bL21-likeFamily
V [auth Av]IPR001787Large ribosomal subunit protein bL21Family
V [auth Av]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
W [auth Aw]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
W [auth Aw]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
W [auth Aw]IPR001063Large ribosomal subunit protein uL22Family
Y [auth Ay]IPR003256Large ribosomal subunit protein uL24Family
Y [auth Ay]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
Y [auth Ay]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Y [auth Ay]IPR005824KOWDomain
Y [auth Ay]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth AB]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
BA [auth AB]IPR026569Large ribosomal subunit protein bL28Family
BA [auth AB]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth AC]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
CA [auth AC]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
CA [auth AC]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
C [auth Ac]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth Ac]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth Ac]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth Ac]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth Ac]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth Ac]IPR002171Large ribosomal subunit protein uL2Family
GA [auth AG]IPR000473Large ribosomal subunit protein bL36Family
GA [auth AG]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
NA [auth AN]IPR013870Large ribosomal subunit protein mL54Family
TA [auth AT]IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily
TA [auth AT]IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
VA [auth AV]IPR018967Iron-binding zinc finger, CDGSH typeDomain
VA [auth AV]IPR042216MitoNEET, CDGSH iron-sulfur domainHomologous Superfamily
BB [auth Bf]IPR000851Small ribosomal subunit protein uS5Family
BB [auth Bf]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
BB [auth Bf]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
IB [auth Bm]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
IB [auth Bm]IPR001892Small ribosomal subunit protein uS13Family
IB [auth Bm]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
IB [auth Bm]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
KB [auth Bo]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
KB [auth Bo]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth Bo]IPR000589Small ribosomal subunit protein uS15Family
MB [auth Bq]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MB [auth Bq]IPR000266Small ribosomal subunit protein uS17Family
NB [auth Br]IPR001648Small ribosomal subunit protein bS18Family
NB [auth Br]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
ZB [auth BD]IPR039603Small ribosomal subunit protein mS41Family
ZB [auth BD]IPR019083IGR domainDomain
KC [auth BO]IPR004102Poly(ADP-ribose) polymerase, regulatory domainDomain
MC [auth BQ]IPR035979RNA-binding domain superfamilyHomologous Superfamily