6YN1 | pdb_00006yn1

Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
CA [auth c]	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
MA [auth m]	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
HA [auth h]	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Core histone-like	8042439	3001387	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
LA [auth l]	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
GA [auth g]	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
BA [auth b]	SCOP2B Superfamily	Core histone-like	8070525	3001387	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
KA [auth k]	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
FA [auth f]	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
B	SCOP2 Family	Nucleosome core histones	8106031	4000793	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Core histone-like	8106032	3001387	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
AA [auth a]	SCOP2B Superfamily	Core histone-like	8041279	3001387	SCOP2B (2022-06-29)
JA [auth j]	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
EA [auth e]	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Core histone-like	8067126	3001387	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
CA [auth c]	Cation_ATPase	e6yn1c1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
I	Cation_ATPase	e6yn1I1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
X	Cation_ATPase	e6yn1X1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
S	Cation_ATPase	e6yn1S1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
N	Cation_ATPase	e6yn1N1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
MA [auth m]	Cation_ATPase	e6yn1m1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
HA [auth h]	Cation_ATPase	e6yn1h1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
D	Cation_ATPase	e6yn1D1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
W	Cation_ATPase	e6yn1W1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
R	Cation_ATPase	e6yn1R1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
M	Cation_ATPase	e6yn1M1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
LA [auth l]	Cation_ATPase	e6yn1l1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
H	Cation_ATPase	e6yn1H1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
GA [auth g]	Cation_ATPase	e6yn1g1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
C	Cation_ATPase	e6yn1C1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
BA [auth b]	Cation_ATPase	e6yn1b1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
V	Cation_ATPase	e6yn1V1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
Q	Cation_ATPase	e6yn1Q1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
L	Cation_ATPase	e6yn1L1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
KA [auth k]	Cation_ATPase	e6yn1k1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
G	Cation_ATPase	e6yn1G1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
FA [auth f]	Cation_ATPase	e6yn1f1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
B	Cation_ATPase	e6yn1B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
AA [auth a]	Cation_ATPase	e6yn1a1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
JA [auth j]	Cation_ATPase	e6yn1j1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
K	Cation_ATPase	e6yn1K1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
Z	Cation_ATPase	e6yn1Z1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
U	Cation_ATPase	e6yn1U1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
P	Cation_ATPase	e6yn1P1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
F	Cation_ATPase	e6yn1F1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
EA [auth e]	Cation_ATPase	e6yn1e1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)
A	Cation_ATPase	e6yn1A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cation_ATPase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
CA [auth c]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
X	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
W	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
R	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
M	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
LA [auth l]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
H	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
GA [auth g]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
C	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
BA [auth b]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
V	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
Q	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
L	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
KA [auth k]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
G	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
FA [auth f]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
B	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)
AA [auth a]	1.10.20.10	Mainly Alpha	Orthogonal Bundle	Histone, subunit A	Histone, subunit A	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
BA [auth b], C, GA [auth g], H, LA [auth l], BA [auth b], C, GA [auth g], H, LA [auth l], M, R, W	PF00125	Core histone H2A/H2B/H3/H4 domain (Histone)	Core histone H2A/H2B/H3/H4 domain		Domain
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	PF00125	Core histone H2A/H2B/H3/H4 domain (Histone)	Core histone H2A/H2B/H3/H4 domain		Domain
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	PF16211	C-terminus of histone H2A (Histone_H2A_C)	C-terminus of histone H2A	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	Aprataxin and PNK-like factor	protein binding binding histone binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding DNA endonuclease activity endonuclease activity catalytic activity, acting on DNA nuclease activity catalytic activity, acting on a nucleic acid catalytic activity DNA nuclease activity protein binding binding histone binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding DNA endonuclease activity endonuclease activity catalytic activity, acting on DNA nuclease activity catalytic activity, acting on a nucleic acid catalytic activity DNA nuclease activity protein carrier chaperone histone chaperone activity molecular carrier activity hydrolase activity, acting on ester bonds 3'-5' exonuclease activity hydrolase activity exonuclease activity ADP-D-ribose modification-dependent protein binding modification-dependent protein binding poly-ADP-D-ribose binding carbohydrate derivative binding DNA-(apurinic or apyrimidinic site) endonuclease activity protein folding chaperone cation binding transition metal ion binding zinc ion binding ion binding metal ion binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process DNA repair-dependent chromatin remodeling cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis localization protein localization to chromatin protein localization to chromosome cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process DNA repair-dependent chromatin remodeling cellular component organization chromatin organization chromatin remodeling cellular component organization or biogenesis localization protein localization to chromatin protein localization to chromosome protein localization to organelle macromolecule localization intracellular protein localization regulation of epithelial to mesenchymal transition developmental process regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation animal organ development regulation of cell differentiation mesenchyme development tissue development epithelial to mesenchymal transition cell differentiation anatomical structure development mesenchymal cell differentiation adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains lymphocyte mediated immunity regulation of immune effector process multicellular organismal process regulation of DNA recombination regulation of leukocyte activation regulation of cell activation B cell activation involved in immune response cell activation involved in immune response regulation of primary metabolic process nucleobase-containing compound metabolic process multicellular organism development leukocyte mediated immunity regulation of immune system process somatic diversification of immune receptors regulation of nucleobase-containing compound metabolic process somatic recombination of immunoglobulin genes involved in immune response system development immune response regulation of adaptive immune response DNA recombination primary metabolic process DNA metabolic process regulation of B cell mediated immunity immune effector process somatic diversification of immunoglobulins regulation of gene expression regulation of leukocyte mediated immunity biosynthetic process regulation of response to stimulus B cell mediated immunity regulation of immune response regulation of macromolecule biosynthetic process metabolic process regulation of production of molecular mediator of immune response macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process isotype switching immune system development immunoglobulin production immunoglobulin production involved in immunoglobulin-mediated immune response somatic cell DNA recombination lymphocyte activation leukocyte activation somatic diversification of immunoglobulins involved in immune response somatic recombination of immunoglobulin gene segments regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains regulation of immunoglobulin mediated immune response regulation of B cell activation leukocyte activation involved in immune response regulation of multicellular organismal process lymphocyte activation involved in immune response regulation of biosynthetic process production of molecular mediator of immune response regulation of isotype switching B cell activation cell activation regulation of macromolecule metabolic process gene expression adaptive immune response immunoglobulin mediated immune response macromolecule biosynthetic process nucleic acid metabolic process regulation of lymphocyte mediated immunity regulation of immunoglobulin production immune system process somatic diversification of immune receptors via germline recombination within a single locus regulation of lymphocyte activation multi-multicellular organism process reproductive process female pregnancy embryo implantation multi-organism reproductive process single strand break repair DNA repair double-strand break repair double-strand break repair via nonhomologous end joining	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen site of double-strand break membraneless organelle site of DNA damage intracellular membraneless organelle chromosome
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	Histone H4	DNA binding binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization	protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle cellular anatomical structure organelle membraneless organelle membrane-bounded organelle nucleus intracellular membrane-bounded organelle
BA [auth b], C, GA [auth g], H, LA [auth l], BA [auth b], C, GA [auth g], H, LA [auth l], M, R, W	Histone H3	DNA binding binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	-	protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle cellular anatomical structure organelle membraneless organelle membrane-bounded organelle nucleus intracellular membrane-bounded organelle
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	Histone H2B	DNA binding binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	-	protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle cellular anatomical structure organelle membraneless organelle membrane-bounded organelle nucleus intracellular membrane-bounded organelle
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	Histone H2A	DNA binding binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	regulation of cellular process negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression regulation of cellular process negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process biological regulation heterochromatin organization regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process cellular process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome intracellular membraneless organelle chromatin chromosome intracellular organelle cellular anatomical structure organelle membraneless organelle membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	IPR019406	Aprataxin and PNK-like factor, PBZ domain	Domain
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	IPR041388	PNK, FHA domain	Domain
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	IPR008984	SMAD/FHA domain superfamily	Homologous Superfamily
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	IPR039253	Aprataxin and PNK-like factor	Family
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	IPR009072	Histone-fold	Homologous Superfamily
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	IPR001951	Histone H4	Family
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	IPR035425	CENP-T/Histone H4, histone fold	Domain
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	IPR019809	Histone H4, conserved site	Conserved Site
CA [auth c], D, HA [auth h], I, MA [auth m], CA [auth c], D, HA [auth h], I, MA [auth m], N, S, X	IPR004823	TATA box binding protein associated factor (TAF), histone-like fold domain	Domain
BA [auth b], C, GA [auth g], H, LA [auth l], BA [auth b], C, GA [auth g], H, LA [auth l], M, R, W	IPR009072	Histone-fold	Homologous Superfamily
BA [auth b], C, GA [auth g], H, LA [auth l], BA [auth b], C, GA [auth g], H, LA [auth l], M, R, W	IPR000164	Histone H3/CENP-A	Family
BA [auth b], C, GA [auth g], H, LA [auth l], BA [auth b], C, GA [auth g], H, LA [auth l], M, R, W	IPR007125	Core Histone H2A/H2B/H3 domain	Domain
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	IPR009072	Histone-fold	Homologous Superfamily
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	IPR055333	Histone H2B, conserved site	Conserved Site
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	IPR000558	Histone H2B	Family
AA [auth a], B, FA [auth f], G, KA [auth k], AA [auth a], B, FA [auth f], G, KA [auth k], L, Q, V	IPR007125	Core Histone H2A/H2B/H3 domain	Domain
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	IPR009072	Histone-fold	Homologous Superfamily
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	IPR002119	Histone H2A	Family
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	IPR032454	Histone H2A, C-terminal domain	Domain
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	IPR032458	Histone H2A conserved site	Conserved Site
A, EA [auth e], F, JA [auth j], K, A, EA [auth e], F, JA [auth j], K, P, U, Z	IPR007125	Core Histone H2A/H2B/H3 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
DA [auth d], E, IA [auth i], J, NA [auth n], DA [auth d], E, IA [auth i], J, NA [auth n], O, T, Y	Pharos: Q8IW19	celiac disease osteosarcoma lung carcinoma vascular disease nicotine dependence