6VJU
Crystal Structure of Cystathionine beta synthase from Legionella pneumophila with LLP, PLP, and homocysteine
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d6vjub1 | Alpha and beta proteins (a/b) | Tryptophan synthase beta subunit-like PLP-dependent enzymes | Tryptophan synthase beta subunit-like PLP-dependent enzymes | automated matches | automated matches | (Legionella pneumophila ) [TaxId: 446 ], | SCOPe (2.08) |
B | d6vjub2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Legionella pneumophila ) [TaxId: 446 ], | SCOPe (2.08) |
A | d6vjua1 | Alpha and beta proteins (a/b) | Tryptophan synthase beta subunit-like PLP-dependent enzymes | Tryptophan synthase beta subunit-like PLP-dependent enzymes | automated matches | automated matches | (Legionella pneumophila ) [TaxId: 446 ], | SCOPe (2.08) |
A | d6vjua2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Legionella pneumophila ) [TaxId: 446 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 8099734 | 3001427 | SCOP2B (2021-05-27) |
A | SCOP2 Family | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 8099733 | 4000798 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 8099734 | 3001427 | SCOP2 (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | PF00291 | e6vjuB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology) | T: Tryptophan synthase beta subunit-like PLP-dependent enzymes | F: PF00291 | ECOD (1.6) |
A | PF00291 | e6vjuA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Tryptophan synthase beta subunit-like PLP-dependent enzymes (From Topology) | T: Tryptophan synthase beta subunit-like PLP-dependent enzymes | F: PF00291 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.1100 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (utative) | |
A | 3.40.50.1100 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00291 | Pyridoxal-phosphate dependent enzyme (PALP) | Pyridoxal-phosphate dependent enzyme | - | Family | |
PF00291 | Pyridoxal-phosphate dependent enzyme (PALP) | Pyridoxal-phosphate dependent enzyme | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | Homologous Superfamily | |
IPR001926 | Tryptophan synthase beta chain-like, PALP domain | Domain | |
IPR001216 | Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site | Binding Site | |
IPR036052 | Tryptophan synthase beta chain-like, PALP domain superfamily | Homologous Superfamily | |
IPR001926 | Tryptophan synthase beta chain-like, PALP domain | Domain | |
IPR001216 | Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site | Binding Site |